Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0283 ATGGCAATTGGGTACATGGAAGTGCTGCTGGTGAAAGCAAAGGGGCTTCATGAATCTGATATCCTTTCTCGTATGGATCCATATGTTCTAGTACAATACAAAAGCCAAGAGCGCAAAAGCAGTGTACCTCATGGGGCTGGTAGTGATCCTGTATGGAATGAGAGAATAGTGTTCAAAGTGGAATACCCTGGCTCAGGTGACAAATACAAGCTTTGCCTTAAAATCATGGACCGTGATGTATTTTCTGCAGATGATTTTGTTGGCCAGGCCGTAATCTATGTGAAGGATTTATTGGCAGAAGGAGCAGAGAAAGGATCAGCTAAGCTTAATCCTCGCAAGTATAGTGTGGTTAGAGAGAACCAATTTTATTGTGGTGAAATTGAAGTTGGTGTAACTTTCACCCTAAAGGAAGATGAACAATGTGACAACGATATTGGGGGATGGAAAGAAAGTCACCATGAGTTGCATCATCAAATTCAATGA 483 0.4161 MAIGYMEVLLVKAKGLHESDILSRMDPYVLVQYKSQERKSSVPHGAGSDPVWNERIVFKVEYPGSGDKYKLCLKIMDRDVFSADDFVGQAVIYVKDLLAEGAEKGSAKLNPRKYSVVRENQFYCGEIEVGVTFTLKEDEQCDNDIGGWKESHHELHHQIQ 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0283 160 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 152 - -
Lal6g0283 160 SMART C2_3c 5 106 IPR000008 -
Lal6g0283 160 Pfam C2 domain 4 104 IPR000008 -
Lal6g0283 160 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Lal6g0283 160 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 134 IPR035892 -
Lal6g0283 160 Gene3D C2 domain 2 134 IPR035892 -
Lal6g0283 160 PANTHER C2 DOMAIN-CONTAINING 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0283 Lal-Chr6 1857452 1858906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0283 3 109 C2H2 Transcription Factor Family AT4G21160 29.907 7.34e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0283 - - gmx:100500493 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0283 6 1857452 1858906 Lal6g0283 6 1857452 1858906 ECH
Lal22g0272 22 1742299 1744090 Lal6g0283 6 1857452 1858906 LSH