Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0275 ATGGTCCTCGACACAGGGAGTGAACTCTCCTGGCTACACTGCAAAAAACTCTCTAACCTAAACTCCATTTTCAACTCACTCCTCTCTTCTTCGTATTCCCACACACCATGCACCTCTTCCATCTGCGCAACTCGAACACGAGACTTTCCCATACCCGTTTCATGCGACCCGAACAAACTCTGCCACGTCATCATATCCTACGCTGACGCCTCCTCCATCGAGGGAAACCTCGCCACTGATACATTCTTCATCGGAGGATACGCACAACCCGGGTCAATATTCGGGTGCATGGATACCGGGTACAGTTCCAACACCGATGAAGATTCCAAAACAACCGGGTTAATGGGCATGAACCGAGGGTCACTCTCTTTCGTGAACCAATTGGGTTTACCCAAATTCTCGTACTGCATCTCCTCCAGTGATTCCTCCGGCGTGCTTCTCTTTGGCGGTGGGGCCACCACGTTCCCGTGGCTGGGGCCTCTTAACTACACGCCCTTAGTCAAAACGACGTCGTCATTGCCGTATTTCGATCGTGTCGCATACACGGTTCAGCTCGAAGGGATTAAAGTTTCGGAGAAATTGCTGCAACTACCAAAATCCGTTTTTGTACCAGATCACACCGGGGCGGGTCAGACAATGGTGGATTCGGGTACCCAGTTCACGTTTTTGCTCGGGTCGGTTTGCACTGCTTTGAAAAACGAGTTCGTGGCTCAAACTAAGGGGGTGTTGACGCTTCTTGATGACGCGAATTTTATATTTGAGGGGGCGATGGATTTGTGTTATAGAGTTCCCGTGAGTTGGGCAAGTCTTCCGCCGTTACCGGTGGTGACGATGGTGTTTACGGGGGCGGAATTGAGAATTTCCGGGGAGAGGTTGTTATATAACGTGGTTGACGTGGCAAAGGGGAGTAATGAATGGGTGTATTGTTTCACGAGGATTGAGGCTTATGTGATTGGCCATCATCATCAACAGAACGTGTGGATGGAGTTTGATTTTCTAGAGTTGGGTTCACCGATACTAAATGTGACCTTGCTAGTCAACGGCTAG 1047 0.4986 MVLDTGSELSWLHCKKLSNLNSIFNSLLSSSYSHTPCTSSICATRTRDFPIPVSCDPNKLCHVIISYADASSIEGNLATDTFFIGGYAQPGSIFGCMDTGYSSNTDEDSKTTGLMGMNRGSLSFVNQLGLPKFSYCISSSDSSGVLLFGGGATTFPWLGPLNYTPLVKTTSSLPYFDRVAYTVQLEGIKVSEKLLQLPKSVFVPDHTGAGQTMVDSGTQFTFLLGSVCTALKNEFVAQTKGVLTLLDDANFIFEGAMDLCYRVPVSWASLPPLPVVTMVFTGAELRISGERLLYNVVDVAKGSNEWVYCFTRIEAYVIGHHHQQNVWMEFDFLELGSPILNVTLLVNG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0275 348 Gene3D Acid Proteases 159 334 IPR021109 -
Lal6g0275 348 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 1 333 - -
Lal6g0275 348 CDD pepsin_A_like_plant 1 331 IPR034161 -
Lal6g0275 348 PANTHER ASPARTYL PROTEASE-RELATED 1 333 IPR001461 GO:0004190|GO:0006508
Lal6g0275 348 Gene3D Acid Proteases 1 149 IPR021109 -
Lal6g0275 348 Pfam Xylanase inhibitor N-terminal 1 150 IPR032861 -
Lal6g0275 348 SUPERFAMILY Acid proteases 1 332 IPR021109 -
Lal6g0275 348 Pfam Xylanase inhibitor C-terminal 180 332 IPR032799 -
Lal6g0275 348 ProSiteProfiles Peptidase family A1 domain profile. 1 343 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0275 Lal-Chr6 1798817 1801603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0275 3 149 Miscellaneous Gene Families AT1G44130 31.447 6.84e-11 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0275 6 1798817 1801603 Lal18g1330 18 15777268 15778605 ECH
Lal9g1598 9 18344011 18346264 Lal6g0275 6 1798817 1801603 ECH
Lal6g0275 6 1798817 1801603 Lal6g0275 6 1798817 1801603 ECH