Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0272 ATGTCTAATAGTTGGTGGGCTGGGAACGTGGCTATGAAGCAAACTGAGCCTAACTCTTCTTCTCCACCTCTCCAGCTGAGAAACCAAACTGAAGAACAAGTTGAGCTGATTCCAGTGAAACCGAGACAAGAACAAGAATTCATGAACAAGAACAACAGCAACAATAATCTAGCAACCCTAACCAACAGCACCAACAGCAACAACAATAGCACTGAAGATGATGAGAACAACAACTACCGCGACGGGGACGACAACAACAACAACCATGGTACGCCGGATCAAGGCCGCCGCCGTCCCAGAGGCAGGCCGCCGGGCTCAAAAAACAAGCCCAAACCTCCAGTCGTGATAACGAAAGAGAGCCCCAACGCGCTTCGGAGCCACGTTTTGGAGATCAGCAGCGGCAACGATGTGGCTGAGTGCATTGCCACCTTCGCTAACCGCCGCCACCGCGGGGTTTCGGTGCTTAGCGGCAGCGGGGTAGTAAACAATGTCACCCTGCGGCAAGCGGCTGCACCGGGTGGGGTTATAACCCTTCATGGAAGGTTCGATATTTTGTCTCTGTCAGGAGCGTTTTTGCCTGCACCATCTCCACCAGGTGCTACCGGTTTGACGGTTTACTTAGCCGGTGGGCAAGGTCAGGTTGTTGGTGGGATCGTGGGGGGTCCGTTGGTTTGTGTGGGTCCCGTTATTGTTATAGCTGCAACTTTTGCTAATGCTACTTATGAGAGACTATCGGTTGAGGATGATCCAGGTGAAGAGGAAGTGCAATTGCAACAGCAGCAACAAGTTAATGAAAGTGGTGATGGAACTCATGTATCTCTGGGTTTAGCTGAACAACAAGTTCCAATGCCTGTGTATAATCTGAATCCAAGTCTGGTACCAACAAATGGTCAAAATCAAATGGTGCATGATGTGTTTTGGGGTCCTCCACCTCGCTCTTCACCTCCACCGCATGATCTTTGA 963 0.5057 MSNSWWAGNVAMKQTEPNSSSPPLQLRNQTEEQVELIPVKPRQEQEFMNKNNSNNNLATLTNSTNSNNNSTEDDENNNYRDGDDNNNNHGTPDQGRRRPRGRPPGSKNKPKPPVVITKESPNALRSHVLEISSGNDVAECIATFANRRHRGVSVLSGSGVVNNVTLRQAAAPGGVITLHGRFDILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGIVGGPLVCVGPVIVIAATFANATYERLSVEDDPGEEEVQLQQQQQVNESGDGTHVSLGLAEQQVPMPVYNLNPSLVPTNGQNQMVHDVFWGPPPRSSPPPHDL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0272 320 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 51 314 IPR014476 GO:0003680
Lal6g0272 320 MobiDBLite consensus disorder prediction 74 100 - -
Lal6g0272 320 MobiDBLite consensus disorder prediction 1 121 - -
Lal6g0272 320 CDD DUF296 125 208 IPR005175 -
Lal6g0272 320 SUPERFAMILY AF0104/ALDC/Ptd012-like 121 245 - -
Lal6g0272 320 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 237 IPR005175 -
Lal6g0272 320 Gene3D - 124 265 - -
Lal6g0272 320 MobiDBLite consensus disorder prediction 1 32 - -
Lal6g0272 320 MobiDBLite consensus disorder prediction 45 73 - -
Lal6g0272 320 ProSiteProfiles PPC domain profile profile. 121 258 IPR005175 -
Lal6g0272 320 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 51 314 - -
Lal6g0272 320 PIRSF ESCAROLA 29 318 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0272 Lal-Chr6 1782319 1783281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0272 97 306 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.264 8.58e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0272 - - qsu:112039774 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0272 6 1782319 1783281 Lal6g0272 6 1782319 1783281 ECH