Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0257 ATGGTTAAGGGTAGACAAGGAGAGCGTGTCAGACTTTATGTTAGAGGAACAATCCTTGGATACAAGAGGTCCAAGTCAAATCAATACCCAAACACTTCTTTGCTCCAGATTGAAGGAGTAAACACCAAGGAAGAGGTTGCATGGTATGCGGGGAAGCGCTTGGCATACATTTACAAAGCCAAGGTTAAGACCAATGGAAGCCACTATCGCTGTATTTGGGGTAAGGTTACCAGATCTCATGGTAACAGTGGCATTGTTCGTGCCAAGTTCAAGTCCAACCTGCCACCTAAATCAATGGTAATTTCTGTACATAGAAATGATCAATTTTTTGGCCTACTTTTGGATCCAGGGTTAGAGTCTTTCTGTATCCAAGCAACATATAAGATTCTAATTACTCGTAGGTGCCCATAG 411 0.4234 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLLQIEGVNTKEEVAWYAGKRLAYIYKAKVKTNGSHYRCIWGKVTRSHGNSGIVRAKFKSNLPPKSMVISVHRNDQFFGLLLDPGLESFCIQATYKILITRRCP 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0257 136 Gene3D translation elongation factor selb, chain A, domain 4 6 105 IPR038661 -
Lal6g0257 136 PANTHER 60S RIBOSOMAL PROTEIN L35A 1 103 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lal6g0257 136 PANTHER 60S RIBOSOMAL PROTEIN L35A-1 1 103 - -
Lal6g0257 136 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lal6g0257 136 Pfam Ribosomal protein L35Ae 12 103 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lal6g0257 136 SUPERFAMILY Translation proteins 12 99 IPR009000 -
Lal6g0257 136 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0257 Lal-Chr6 1676625 1686443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0257 1 99 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 89.899 2.45e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0257 K02917 - pvy:116114256 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0257 6 1676625 1686443 Lal18g1354 18 15942717 15945685 ECH
Lal6g0257 6 1676625 1686443 Lal6g0257 6 1676625 1686443 ECH
Lal18g1354 18 15942717 15945685 Lal6g0257 6 1676625 1686443 LSH