Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0253 ATGGAAGAAGAAATGAACACGAATAATGAAACTCACTGTCAGGCAGAGGGTTTAGATGAATTTAATGGTAGTGAAGATGAAAATGTGAATGAAGTAGAGGAGTTAAATTTTGAAGAGATAAATTTTCAATTATTAAATGAAGATGATGTGAAGAAATATAGGTTTTTAAACAATGATATCGCTTACAAATTTTATAAGATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACTCGGCGAAACAAGGATGGTGAAATTATATGGCAATCATTTTTTTGTGATAGGGAAGGATTTAGAGATAAAAAAAATGAATTGGTTCGGAAGAGGGCGCCGAGAAAAGAGACTAGATGTGGTTGTTTAGCAAGAATGAAAATCCACATTGACAATGAAAAAGGAGATTGGTATGTTAGTTATTTTGTTGATGAACATAATCATGAATTGGTGGGTGAACATTACGGTGCAATGATAGCCTCTAACAGAAGAATGACAGAGACAGACGTGGCTCAGATGAACACAATGAGAGAAGTGGGGATTGGGACAGGAAAAATATTTGGTTCGTTTGCCGGTCAAAGTGGTGGATATCAGTATATTGGGTTCTCCAAGAAGGACATGTATAATCAAATTCAGAAGCAAAGACTAATAGGAAATGGTGACGCAGAATCAACATTACAATACTTAAAGGACCAATCAAAATCAGATTGTGCAATGTATTGGAGACATACTGTAGATGAAGAAGGTAAGTTACAACAATTATTTTGGGCTGATGGATGCAGCATTTTCGACTACTCAATTTTTGGAGATGTTCTTGCTTTTGATGCAACTTATGGTCGAAACAAATACAAGTTCCCAGTTGTAATTTTTTCTGGTGTGAATCATCACAAGCAAACGACTGTGTTTGGCGCCGCTGTTGTGTCAAATGAGACAGAGGAAACATACATTTGGCTTTTGGAGAAATTTTTGGAGGCAATGATTGGGAAACAACCCAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAGAATGCAATCAAAAGAGTTTTTCCCGAAGCACACCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAAAATAACTTTCATAAGGATTTCCAAAAAGTTATGTATGCTGATGTTGATATTGATGATTTTAATATGATGTGGGAAGAACTTATTGCTAAGCATGGACTTCATAACAATGCATGGGCCGCTCAGATTTTTGATTGCAGAAGTATGTGGGCGAGGTCTTACATTCGGGGAAAGTTCTATGCTGGTTTGCATACTACATCACGTTGTGAGGGATTACACTCACAAATGGGAAGGTATATAGAATCTGGGTATAACGTTACTGAATTTCTACATCACTTTCAACGATGTCTAAGTCACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCATATGGTGATGAGTTGTTACAAACTCCTTATCATAATTTAGAGGGTCATGCTGCTTCGATATATACTAGAGTTGTTTTCAAAGAATTTCGTGCAGTTTTATTGGAAGCAGCAAAATTAAGGATTATTTCTACCCAACAAACATCGACTCATGTAATATACAAGATTGGGAAGCATTACAGTCCGAACAAGAAATGGCATGTATCACATTATGACAATGGCAGTATCGTGGACATTAAATGCTCGTGTAAAAGAATGGAATCTTTTGGGATGCCATGTAGTCATAGTGTTTTTGTCTTACTAATTTTGGACATGTCACAATTGCCATCTTGTTTGGTTCTTGATAGATGGACAAAGAAAGCAAAGGATATTCAACGTCTCAATTTTCAGCAATGTGACCTAAGTAAAGAATCAGTTGAAAGTAGTAGATATGGAGCTTTGAGTGATGGTTGTAGGGTGTTATGTAATCTTGCTTGCAAAACGGAGGAAGACTTTACTGAGATGCTTGAAAAAGTTTATAACGAATGTAGTAGACTCCGATCAAAACAACACTCTAGTGCGATGGAAAATGTTGACAATGCAACTGGAGATCAAGTAAGAGACCCAGTTCGAGTACGTGGTAAAGGAAGAGTACCGGGGATTACCTCAAGGCCCAAGCGAGGTAATCATTGTGGTATATGTCGAGAAATTGGCCACAATAGGGCAAGTTGTCCAAATGTTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCGATGAAGAATGA 2214 0.3672 MEEEMNTNNETHCQAEGLDEFNGSEDENVNEVEELNFEEINFQLLNEDDVKKYRFLNNDIAYKFYKMYGMKKGFGIRKYHTRRNKDGEIIWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDNEKGDWYVSYFVDEHNHELVGEHYGAMIASNRRMTETDVAQMNTMREVGIGTGKIFGSFAGQSGGYQYIGFSKKDMYNQIQKQRLIGNGDAESTLQYLKDQSKSDCAMYWRHTVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFGAAVVSNETEETYIWLLEKFLEAMIGKQPKCVITDGDLSMKNAIKRVFPEAHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVDIDDFNMMWEELIAKHGLHNNAWAAQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYIESGYNVTEFLHHFQRCLSHMRNNEVMEDFKSSYGDELLQTPYHNLEGHAASIYTRVVFKEFRAVLLEAAKLRIISTQQTSTHVIYKIGKHYSPNKKWHVSHYDNGSIVDIKCSCKRMESFGMPCSHSVFVLLILDMSQLPSCLVLDRWTKKAKDIQRLNFQQCDLSKESVESSRYGALSDGCRVLCNLACKTEEDFTEMLEKVYNECSRLRSKQHSSAMENVDNATGDQVRDPVRVRGKGRVPGITSRPKRGNHCGICREIGHNRASCPNVVGSCSRTFDNDFDEE 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0253 737 ProSiteProfiles Zinc finger SWIM-type profile. 548 586 IPR007527 GO:0008270
Lal6g0253 737 Pfam MULE transposase domain 271 365 IPR018289 -
Lal6g0253 737 Pfam FAR1 DNA-binding domain 63 151 IPR004330 -
Lal6g0253 737 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 668 IPR031052 GO:0006355
Lal6g0253 737 PANTHER OS02G0262500 PROTEIN 51 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0253 Lal-Chr6 1649984 1652288 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal6g0253 MULE 3.6e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0253 - - lang:109350553 664.84