Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0246 ATGGCACCAAAAGCTACTAAGGCCGAGAAGAAAATCGCTTACGATGGAAAGCTTTGTCAGCTTCTTGATGAGTATACTCAGATCCTTGTTGTGAATGCTGACAATGTTGGTTCAAACCAGCTCCAGAACATTCGTCAAGGTCTACGTGGTGACTCTGTTGTTCTTATGGGAAAAAACACTATGATGAAGCGTTCTGTTAGGATTCATGCTGAGAAAACTGGCAACCAGGCTTTCCTTAACCTTATCCCTCTTCTTATCGGAAATGTTGGATTGATTTTCACCAAGGGTGATTTGAAGGAGGTTAGCGAGGAAGTTGCAAAGTACAAGGTCGGAGCTCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTCCCTCCAGGCAACACTGGGCTTGATCCCTCCCAGACCTCTTTCTTCCAGGTGCTCAACATTCCCACCAAGATTAACAAGGGTACTGTTGAAATTATCACACCTGTGGAACTCATTAAGAAGGGAGACAAGGTTGGCTCTTCTGAAGCTGCATTGCTTGCCAAGCTTGGGATAAGGCCATTCTCATACGGTCTTGTTGTCCTTTCTGTGTATGATAATGGTTCCGTGTTCAAACCTGAGGTTCTTGATCTCACCGAGGATGATCTCCTTGAGAAGTTTGCCATTGGAGTCTCCCAAGTTACTTCTCTGTCACTGGCCATTTCATATCCAACCCTTGCTGCTGCACCACATGTGTTTATCAATGCCTATAAGAATCTTCTAGCTGTTGCAGTTGCAACAGAATATTCTTTCCCCCAGGCTGATGAAGTTAAGGAGTACTTGAAGGACCCTAGCAAATTTGCTGCCGTAGCTGCTGCTGCTGCACCTGTTGCTGATTCTGGAGCTGCACCAGCTGCTGCTGCCAAGGTAGAGAAGGAGGAAGAGCCAGCTGAAGAATCAGATGATGATATTGGTTTTGGTCTATTCGATGAATAG 969 0.4561 MAPKATKAEKKIAYDGKLCQLLDEYTQILVVNADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQVTSLSLAISYPTLAAAPHVFINAYKNLLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPVADSGAAPAAAAKVEKEEEPAEESDDDIGFGLFDE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0246 322 MobiDBLite consensus disorder prediction 295 322 - -
Lal6g0246 322 Gene3D - 6 209 IPR043141 -
Lal6g0246 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 321 - -
Lal6g0246 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 321 - -
Lal6g0246 322 PIRSF L10E 1 321 IPR030670 GO:0042254
Lal6g0246 322 CDD Ribosomal_P0_L10e 9 185 - -
Lal6g0246 322 Pfam Ribosomal protein L10 8 108 IPR001790 -
Lal6g0246 322 Gene3D - 114 185 IPR043164 -
Lal6g0246 322 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Lal6g0246 322 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Lal6g0246 322 MobiDBLite consensus disorder prediction 306 322 - -
Lal6g0246 322 Pfam 60s Acidic ribosomal protein 234 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0246 Lal-Chr6 1601011 1603402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0246 1 320 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 84.688 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0246 K02941 - jre:108991896 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0246 6 1601011 1603402 Lal18g1365 18 16014035 16016439 ECH
Lal6g0246 6 1601011 1603402 Lal6g0246 6 1601011 1603402 ECH