Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0221 ATGGGTGGTAATTCCCCATGTGCCTCATGCAAACTTCTGAGACGCCGTTGCACCAAAGATTGCACTTTTGCTCCTTATTTCCCTTCTGATGACCCCCAAAAGTTTGCCATAGTTCACAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGCTGCAGGAAATTCCAGTGCAACAGAGAGCAGATGCAGTGAGCAGTTTAGTGTATGAGGCAAATGCAAGAGTTAGGGACCCTGTGTATGGTTGTGTTGGAGCCATATCATATCTGCAAAATCAGGTTTCTGATCTTCAGATGCAGCTTGCAGTTGCTCAAGCAGAGATACTCTGCATCCAGATGCAACATGACCCAGTAGTGATGCCAACCCCAGACATCATTCACTCTGATCAGAAATCTTACTTTCTCCAAAATGAACTCAATCAGTACCTTAATTTTGGATCTTCTACCAATGTAATTCATGATTCTCTCAAGAGAGAGAACATTTTTGGACATGACATGGTTTCTTGA 501 0.4271 MGGNSPCASCKLLRRRCTKDCTFAPYFPSDDPQKFAIVHKVFGASNVSKMLQEIPVQQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSDLQMQLAVAQAEILCIQMQHDPVVMPTPDIIHSDQKSYFLQNELNQYLNFGSSTNVIHDSLKRENIFGHDMVS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0221 166 Coils Coil 85 105 - -
Lal6g0221 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lal6g0221 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 159 - -
Lal6g0221 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 159 - -
Lal6g0221 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0221 Lal-Chr6 1478607 1479840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0221 3 128 AS2 family AT2G30130 81.746 1.77e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal6g0221 LOB 1.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0221 - - lang:109360574 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0221 6 1478607 1479840 Lal6g0221 6 1478607 1479840 ECH
Lal22g0213 22 1315018 1316233 Lal6g0221 6 1478607 1479840 LSH