Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0212 ATGAAGTTTGACTCAGAGTCCAAGGTTACCCAAGTTCTCCTACAACCAGATTGGGAGAAGACCCCAAAAGAAGAAGAACCTCAGTCCCAATATGGGTCCATTTCTGGAGCAGTGTTCAACATATCAACCACCACTATCGGTGCTGGAATCATGGCAATACCTGCTACAATGAAGGTGGTAGGAATAATTCCAGGGTTCATGGCGATTGTTTTGGTGGCGTTTTTGTCAGATATCACTACGGAGTTTATGGTAAGGTACACAACTTCAGGAGAATCCACTACCTACGCTGGCATGGTGGGAGAGTCATTTGGCCCCCTTGGATCTCTTGCTGTTAAGATGTGTATCATCCTAACCACTCTAGGTGTCCTTATCATCGATCTAATTATTCTTGGTGACGTGCTATGTGGAAATGAGTCCAAAGGAATGAAACACTTGGGCATTCTACAAGAATGGTTTGGCATCCATTGGTGGACCTCTCGCTATTTTGCTCTTCTTATAGTCGTGCTCTTCATTTTGCTTCCATTGGTTATGTTAAGGCATATTGATACACTCAGGTACAGTTCTGCAATATCAATCCTACTTGCACTGGCCTTTGTTGTCATAAGCTCATCAATGGCATTTTATGCATTATGGTGCGGCAAAACTCAGCCACTCAGGATACTCCCTGACTTCTCTCAAGTCACTGTCTTTGACATTTTCACCACTATTCCAGTCTTTGTCTGCGGTTTCGGCTTCCATATGAGTGTTCATCCAATTAGAGCAGAACTTGGAAAACCTAGAGACATGACTTGTGCAGTGAGGATTTCTTTGTTAATATGCGTGGTTTTATACTTTGCTATTGGTTTCTTTGGGTACCTATTGTTTGGAGACTCCATCATGGCAGATATACTAGTAAACTTTGACCATAATTCCAATTCTTATATTGGAAGTTTACTCAATGACATTGTTCGATTAAGCTATGCACTTCATCTTGCACTTGTGTTTCCCATCCTCAACTATTCCTTGAGGGCCAACATAGATGAATTAGTATTCTCAAACAAAAATAGGCCTGCTCTAGCCTTAGACACCCCTAGATTTGTTTCTCTCACTCTTTCTTTCCTAGCTCTCATATACTTGGTGGCAGTGGCAATCCCAAACATATGGTTATTCTTTCAGTTCTTGGGATCCACAACCATTGTTTGCATCTCATTCATCTTCCCTGCTTCAATCATTCTAAGGGATGTGCACGGTATATCGACTAGAAAAGATAAAGTGGTGGCAATAGGGATTATTGTTTTGGCTGTGGGGACAAGTGCAATTGCTATTTGGAGCAACTTGTATGGTTCAACTGCTGATCCTTGA 1341 0.4183 MKFDSESKVTQVLLQPDWEKTPKEEEPQSQYGSISGAVFNISTTTIGAGIMAIPATMKVVGIIPGFMAIVLVAFLSDITTEFMVRYTTSGESTTYAGMVGESFGPLGSLAVKMCIILTTLGVLIIDLIILGDVLCGNESKGMKHLGILQEWFGIHWWTSRYFALLIVVLFILLPLVMLRHIDTLRYSSAISILLALAFVVISSSMAFYALWCGKTQPLRILPDFSQVTVFDIFTTIPVFVCGFGFHMSVHPIRAELGKPRDMTCAVRISLLICVVLYFAIGFFGYLLFGDSIMADILVNFDHNSNSYIGSLLNDIVRLSYALHLALVFPILNYSLRANIDELVFSNKNRPALALDTPRFVSLTLSFLALIYLVAVAIPNIWLFFQFLGSTTIVCISFIFPASIILRDVHGISTRKDKVVAIGIIVLAVGTSAIAIWSNLYGSTADP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0212 446 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 12 444 - -
Lal6g0212 446 MobiDBLite consensus disorder prediction 1 31 - -
Lal6g0212 446 Pfam Transmembrane amino acid transporter protein 33 418 IPR013057 -
Lal6g0212 446 PANTHER AMINO ACID TRANSPORTER 12 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0212 Lal-Chr6 1425535 1427970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0212 22 445 Amino Acid or Auxin Permease AAAP Family AT3G56200 54.801 3.86e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0212 - - ahf:112765408 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0212 6 1425535 1427970 Lal6g0212 6 1425535 1427970 ECH
Lal18g1401 18 16227102 16229749 Lal6g0212 6 1425535 1427970 LSH
Lal6g0212 6 1425535 1427970 Lal17g1601 17 17399983 17403286 PCT