Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0184 ATGAAGCTCAAATTTGTGTTCCTTCTGTTGTTGGAGTGTGTTTGTTTCATTGTGGAATCCAAGTGTATCAATGGGTGTGACTTAGCTTTAGCTTCATACTATGTTTCTGTATGGCCTAGTGTATCACTGGGAAATATAACTAGCTTCATGCATTCAAATGTTTTGACCAAATCAGATGTTATTATCAGCTACAATAAAGGCAAAATATTCAATGGAGATGTGCTTCTATCCTTAACCAGAACCAATGTTCCATTCCCCTGTGATTGCATTGGTGGTGAGTTTCTTGGGCATATGTTTGAGTACTCAGCTGTAGCAGGAGACACTTATGATACTATTGCAATGAAGAGTTATTCCAATCTGACCACTGTTGAGTTTTTGAAGAGGTTCAATAGCTATGACCCTAATCATATACCGGTTAATGCTAAGGTTAATGTCACAGTCAATTGTTCTTGTGGGAACAGCCTCATTTCAAAAGATTATGGATTGTTCACTACTTATCCCCTCAGGCCTGGGAATGATCTTCAGGAGCTTTCAAAGGAGAGTAATATTGATGCAAAGTTGCTGCAGAGTTATAACCCTGATGTTAATTTCAGCCAAGAAAGTGGAATTGTTTTCATTCCAGGAAGAGATCAAAATGGAGTCTATGTTCCCTTGTATCCTAGAACAAGAGGTCTAGCTAGAGGTGTTGCTGTTGGAATATCTATAGCAGCAACATGCGGGCTTGTTTTATTAATAACTTGCATATATGATAGATACTTCAAGAAGAAGGAAGGAGAAAAAGCTAAATTGTCTAAAGAAAATTCAATAGGGCTTTCAACTGAAGATGGAACTGAATCTAAGTTCAATAGCTTGAGGAACATGATAAAACTTGCTGATTTTTCTTCTTCTCGCTTCCGGGGTGAAGGCTCTGGTAGTGGTGAATATGAAACTTCAGGATCCAGTGGGCATGCTGTTGGCCTTACAGGCATAATGGTGGTAAAATCATTGGAGTTCTCATATCAAGAACTAGCCAAGGCTACAAATAACTTTAGTTTGGATAATAAAATTGGTCAAGGTGGTTTTGGAGCTGTCTATTATGCAGAACTTAGAGGCGAGAAAACAGCAATTAAGAAGATGGATGTTCAAGCGTCATCAGAATTTCTTGCTGAGTTGAAGGTCTTAACACACATTCATCACTTGAATTTGGTGCGGTTGATTGGATATTGCGTTGAGGGATCACTTTTCCTTGTATATGAATACATTGACAATGGAAACTTAGGCCAATATTTGCATGGTAAAGGGAGAGATCCATTGCCATGGTCTACTAGGCTGCAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATATATTCATGAGCACACTGTGCCTTTGTATATCCATCGTGATGTAAAATCTGCAAATATATTGATAGACAAAAATTTGCGTGGAAAGGTAGCAGATTTTGGCCTAACCAAACTTATTGAAGTTGGAACTTCCTCTTTTCACACTAGACTTGTGGGAACATTTGGATACATGCCACCTGAGTATGCTCAATATGGTGACATATCTTCAAAAATAGATGTATATGCATTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAGTGCTATTCTGAAAACAGGTGAAACTGTTTCAGAATCAAAAGGCCTTGTAACTTTGTTTGAGGGAGCACTTAATCAGATTAATCCTTTAGAAGCTCTTCGCAAACTGGTGGACCCTAGGCTTGGAGATAACTATCCAATTGAATCAGTTCTCAAGATTGGCCAACTTGGGAGAGCATGTACAAGAGACAATCCATTACTACGGCCTAACATGAAATCTATAGTTGTTGCTCTTATGACACTTTCATCATCTTCACAAGATGGAACTTCCTATGATAATCAAACTCTCATAAATCTACTCTTAGATGAAGGCTTCCGTGAGATAATTACACCAACTTCTTAA 1947 0.3821 MKLKFVFLLLLECVCFIVESKCINGCDLALASYYVSVWPSVSLGNITSFMHSNVLTKSDVIISYNKGKIFNGDVLLSLTRTNVPFPCDCIGGEFLGHMFEYSAVAGDTYDTIAMKSYSNLTTVEFLKRFNSYDPNHIPVNAKVNVTVNCSCGNSLISKDYGLFTTYPLRPGNDLQELSKESNIDAKLLQSYNPDVNFSQESGIVFIPGRDQNGVYVPLYPRTRGLARGVAVGISIAATCGLVLLITCIYDRYFKKKEGEKAKLSKENSIGLSTEDGTESKFNSLRNMIKLADFSSSRFRGEGSGSGEYETSGSSGHAVGLTGIMVVKSLEFSYQELAKATNNFSLDNKIGQGGFGAVYYAELRGEKTAIKKMDVQASSEFLAELKVLTHIHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGKGRDPLPWSTRLQIALDSARGLEYIHEHTVPLYIHRDVKSANILIDKNLRGKVADFGLTKLIEVGTSSFHTRLVGTFGYMPPEYAQYGDISSKIDVYAFGVVLYELISAKSAILKTGETVSESKGLVTLFEGALNQINPLEALRKLVDPRLGDNYPIESVLKIGQLGRACTRDNPLLRPNMKSIVVALMTLSSSSQDGTSYDNQTLINLLLDEGFREIITPTS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0184 648 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 4 635 - -
Lal6g0184 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Lal6g0184 648 ProSiteProfiles Protein kinase domain profile. 343 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0184 648 Gene3D Transferase(Phosphotransferase) domain 1 414 636 - -
Lal6g0184 648 Gene3D Phosphorylase Kinase; domain 1 323 413 - -
Lal6g0184 648 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 635 IPR044812 GO:0019199|GO:0045087
Lal6g0184 648 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lal6g0184 648 SMART serkin_6 343 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0184 648 SUPERFAMILY Protein kinase-like (PK-like) 323 613 IPR011009 -
Lal6g0184 648 Pfam Protein tyrosine and serine/threonine kinase 344 610 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0184 Lal-Chr6 1275528 1279986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0184 1 635 Receptor kinase-like Gene Family AT3G21630 53.178 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal6g0184 PK_Tyr_Ser-Thr 6.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0184 - K13429 gmx:100776847 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1442 18 16477524 16481395 Lal6g0184 6 1275528 1279986 LSH