Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0168 ATGGAAGACAAAGTAGCAAGATCAAGTGAAGGACAACCCATAAGATGCAAAGCTGCAATTTGTCGCAAAAAAGGTGAGCTTTTGAGTATTGAGGAGATCTTTGTGGCGCCACCAATGCCTCATGAAGCTAGGATTCGTATTATTTGCACCTCTCTCTGTCACAGTGATGTCATCTTTTGGAACTCGGAGGAACCTCATGCAATGTTCCCAAGAATTCTGGGTCATGAAGCAGTTGGGATTGTGGAGAGTGTGGGGAAGGATGTAAGTGAAGTAAGAAAAGGAGATGTAGTTTTGCCACTTTACATGGCAGATTGTGGAGAGTGTACAGATTGCAAATCAAGTAAGAGTAACAATTGTTCCAAGTTTCCTTTCAAGAACTCTCCCTGGATGCCTAGATATCCTACTAGTAGATTCACTGATCTAAAAGGAGAGATCATACTCCATTTCATGTTTATTTCGAGTTTTAGCGAGTACACCGTGCTTGATGTTGCCAATCTAATCAAGATTGACCCTGCAATTCCTCCCAACATGGCATGTCTCCTGGGTTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAAAACAGCGCGTGTGGAGCCAGGATCTACAGTAGCTATTTTTGGGCTGGGATGTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGATATCAACCCAGAGAAACATGAAATTGGAAAGAAGTTTGGAGTCACAGACTTTATCAATTCTAGAGAATGTGGAAACAAAACTGTGAGCCAGATTATCAAAGAGATAACAGATGGAGGAGCAGATTATTGCTTTGAGTGTGTTGGTATGGCATCATTGGTGCATGAAGCCTATGCTTCTTGTAGAAAGAATTGGGGGAAAACAGTTGTTCTAGGAGTGGACAAGCCAGGATCCATGTTGAGCCTTAGCTCTAGGGAGGTACTTCTCAGTGGGAAGAGCCTAATGGGATCCTTATTTGGAGGACTCAAACCCAAATCTGATGTACAAATTCTCCTTAAACGTTACCTGGACAAGGAGCTGAAGTTGGATGAGTTTGTTACACATGAGGTGGAGTTTAAAGACATCAATAAAGCTTTTGACTTGTTGATTAAAGGACAATCTCTTAGATGTGTGATTTGGATGGACAAACAAAAATGCAGAATGTAG 1179 0.4232 MEDKVARSSEGQPIRCKAAICRKKGELLSIEEIFVAPPMPHEARIRIICTSLCHSDVIFWNSEEPHAMFPRILGHEAVGIVESVGKDVSEVRKGDVVLPLYMADCGECTDCKSSKSNNCSKFPFKNSPWMPRYPTSRFTDLKGEIILHFMFISSFSEYTVLDVANLIKIDPAIPPNMACLLGCGVSTGVGAAWKTARVEPGSTVAIFGLGCIGLAVAEGARLCGATRIIGVDINPEKHEIGKKFGVTDFINSRECGNKTVSQIIKEITDGGADYCFECVGMASLVHEAYASCRKNWGKTVVLGVDKPGSMLSLSSREVLLSGKSLMGSLFGGLKPKSDVQILLKRYLDKELKLDEFVTHEVEFKDINKAFDLLIKGQSLRCVIWMDKQKCRM 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0168 392 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 9 384 - -
Lal6g0168 392 Pfam Zinc-binding dehydrogenase 212 335 IPR013149 -
Lal6g0168 392 Gene3D - 19 380 - -
Lal6g0168 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Lal6g0168 392 Gene3D - 188 328 - -
Lal6g0168 392 PANTHER ALCOHOL DEHYDROGENASE 9 384 - -
Lal6g0168 392 Pfam Alcohol dehydrogenase GroES-like domain 40 168 IPR013154 -
Lal6g0168 392 SUPERFAMILY GroES-like 337 384 IPR011032 -
Lal6g0168 392 SUPERFAMILY GroES-like 9 198 IPR011032 -
Lal6g0168 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 348 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0168 Lal-Chr6 1179395 1188744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0168 42 362 Monolignol Biosynthesis Gene Families AT4G37990 23.242 1.86e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0168 K00121 - gmx:100806887 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0166 22 1032446 1035611 Lal6g0168 6 1179395 1188744 LSH