Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0159 ATGGCTATTGCAGCACCAGGGCAACTGAACGTGACTGAATCCCCCTCTTGGGGTTCCAGAAGCGTTGATTGCTTCGAAAAATTGGAACAAATTGGCGAGGGTACTTATGGTCAAGTTTACATGGCTAAAGAAATCAAGACTGGTGAGATTGTTGCTTTGAAGAAAATACGAATGGATAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTGATCAAGCTGAAAGAAATTGTGACTTCTCCAGGCCCTGAGAAAGATGAACAAGGAAGGCCAGGCAAGTTATTTGTTCCCATGTTATTAGCCAATGGTAACAAGTATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTCGCTGACCGTCCTGGGATGAGATTTACAGTTCCCCAAATTAAGTGTTACATGAAACAACTTTTGACTGGGCTTCACTATTGTCATGTAAATCAAGTTCTTCATCGTGATATCAAAGGGTCAAATCTTCTTATAGACAATGAAGGAAATCTGAAGCTTGCTGATTTTGGGTTGGCACGATCATTTTCTAATGACCACAATGCAAATCTTACAAATCGTGTCATTACATTGTGGTACAGGCCACCTGAGTTACTGCTAGGGACAACAAAGTATGGGCCAGCAGTAGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCCATCTTTCCAGGAAAAGATGAGCCAGAACAATTAAATAAAATATTTGAACTCTGCGGAGCACCAGATGAGGTGATCTGGCCTGGAGTTTCTAAGATTCCTTGGTATAATCAATTTAAGCCCACAAGGCCAATGAAAAGACGTCTGAGGGAAGTTTTTAGGCAGATTTTCTTCCTACGAGTTGAGTATAGTTTTGATCGTCATGCTTTGGAATTGTTAGAGAGGATGCTGGCACTTGATCCGGCGCAGAGAATTACTGCCAAAGATGCACTTGATGCTGAATATTTCTGGACTGATCCATTACCGTGTGATCCCAAGAGCTTGCCCAAGTATGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGCCAGCAACAACGGCAAAATGAAGAAATGGCTAAGCGCCAGAAAATGCAACACCCACAGCAGCACACTCGTCTTCCCCCCATTCAGCAGTCTGGGCAACATGCCCAAATGCGGTCAGGACCTAACCAACAAGTTCATGGCTCTCAACAAGTTCATGCTGGAGGACCTGGTCATCATTATGGGAAGCCTAGAGGTCCATCTGGTGGGCCAGGAAAATATCCCCCTGGTGGGAACCCTGGAGGAGGATACAATCACCCGAATCGTGGAGGTCAAGGAGGAGCAGGAGGTTATGGCAGTGGGCCTTATCCTCCTCCAGGGAGAGGGGCACCTTATGGGTCCAGTGGTATGCCTGGTGGCGGCGGTGGCTTTGGAGTTGGAGCTCCAAATTATACCCAGCAAGGTCCATATGGTGGGTCAGCAGCTGGCCGTGGTTCAAACATGATGGGTGGAAACCGGAATCAACAGTATGGTTGGCAGCAGTGA 1590 0.4541 MAIAAPGQLNVTESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPGKLFVPMLLANGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVIWPGVSKIPWYNQFKPTRPMKRRLREVFRQIFFLRVEYSFDRHALELLERMLALDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRLPPIQQSGQHAQMRSGPNQQVHGSQQVHAGGPGHHYGKPRGPSGGPGKYPPGGNPGGGYNHPNRGGQGGAGGYGSGPYPPPGRGAPYGSSGMPGGGGGFGVGAPNYTQQGPYGGSAAGRGSNMMGGNRNQQYGWQQ 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0159 529 Gene3D Transferase(Phosphotransferase) domain 1 132 383 - -
Lal6g0159 529 SUPERFAMILY Protein kinase-like (PK-like) 19 351 IPR011009 -
Lal6g0159 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lal6g0159 529 Gene3D Phosphorylase Kinase; domain 1 14 131 - -
Lal6g0159 529 MobiDBLite consensus disorder prediction 356 385 - -
Lal6g0159 529 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 471 - -
Lal6g0159 529 PANTHER CELL DIVISION PROTEIN KINASE 5 471 - -
Lal6g0159 529 Pfam Protein kinase domain 25 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0159 529 MobiDBLite consensus disorder prediction 515 529 - -
Lal6g0159 529 MobiDBLite consensus disorder prediction 389 419 - -
Lal6g0159 529 ProSiteProfiles Protein kinase domain profile. 25 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0159 529 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Lal6g0159 529 CDD STKc_CDK9_like 25 343 - -
Lal6g0159 529 SMART serkin_6 25 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0159 529 MobiDBLite consensus disorder prediction 354 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0159 Lal-Chr6 1128556 1133726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0159 1 529 Core Cell Cycle Gene Families AT5G10270 74.019 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal6g0159 Pkinase 3.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0159 K08819 - zju:107421832 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0159 6 1128556 1133726 Lal6g0159 6 1128556 1133726 ECH
Lal22g0150 22 931179 939204 Lal6g0159 6 1128556 1133726 LSH