Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0151 ATGGCTTCTATAGTCGATTCTAATGTTGTTACTGAACCACAACAGCCTAAAGGTGAGAATAAGCAAAAGAATGAAGGAAGAAATAGGAGGGTACTTAAGGATATTGGTAATCTTGTTGTTAAGCAAGCAGATCCTGTTGCTAATGTACCTAAGCGTATCACAAGGAACCTTGGTCGTCAATTGTTGGCTAATGCTCAAGCAGCAGCAGAGAAAAACAAGAAGCCAAACACTGATGTAGGAAACTTGGTTGCTGTAACAAAGGTGGAACAAACTAAGCAGCCAACAGAACCTGAGGTTATTATCATCAGCTCTGAAGATGATGAGGAAGAAAAGGAGAAGCAAGTTGTTAAAGGAGGAAGAAAGGCAAGAGAAAAGGTTGCTGTTAGGGGAAAGAACAACAAGGCCTTCAGTGCTGTCCTATCAGCTAGAAGCAAGGCTGCTTGTGGACTTACTCACAAGCCAAAAGATTTGGTATTGGTAGATGACATTGACCTTGCTGATATTGCCAATGAATTGGAAGCAGTGGAGTACCTTTATGACATTTACAAGTTCTACAAGCTAACTGAGGATGATGGTCGAGTGCATGATTACATGCCTTCACAGCCAGACATCAACATCAAGATGAGATCAATTCTGTTTGATTGGTTAGTAGAAGTGCATCGAAAATTCGAACTCATGCCCGAGACTCTCTATTTGACACTCAATATAGTTGACCGATTCCTATCAATGAAGGCTGTACCTAGAAGGGAACTTCAATTAGTTGGCATCAGTTCAATGCTGATGGCTTGCAAGTATGAAGAAATATGGGCACCAGAGGTTAATGACTTTGTATGCATATCTGACAATGCATATGTTAGAGAAAACATTCTCATCATGGAGAAAACAATCTTGAGTGAGCTTGAATGGTATCTAACCGTTCCCACACCTTATGTCTTCCTCGTTCGGTATATCAAAGCCTCTACTCCCTCCGATAAAAAGATTGAGGACATGGTGTTTTTCCTTGCTGAGCTTAGTTTGATGGATTACCCTGTTGTGATCTCATACTGCCCTTCTCTGATTGCTGCTTCTGCTGTATATGCTGCTAGATGCACCCTTGGAAGGAGCCCTTACTGGACTGAGACTCTAAAACACTATACAGGCTATTCTGAGGAACAGCTAAGGGATTGTGCCAAACTCATGGTCGACCTTCATTCTGATGCTCCAGAAAGTAAGCTCAGGGCTGTTTACAAGAAATTTAGTAGTCTTGAGCGCAGTGCTGTTGCTCTTGTTACTCCAACAAAAAACTTGTCAGCATAG 1296 0.4174 MASIVDSNVVTEPQQPKGENKQKNEGRNRRVLKDIGNLVVKQADPVANVPKRITRNLGRQLLANAQAAAEKNKKPNTDVGNLVAVTKVEQTKQPTEPEVIIISSEDDEEEKEKQVVKGGRKAREKVAVRGKNNKAFSAVLSARSKAACGLTHKPKDLVLVDDIDLADIANELEAVEYLYDIYKFYKLTEDDGRVHDYMPSQPDINIKMRSILFDWLVEVHRKFELMPETLYLTLNIVDRFLSMKAVPRRELQLVGISSMLMACKYEEIWAPEVNDFVCISDNAYVRENILIMEKTILSELEWYLTVPTPYVFLVRYIKASTPSDKKIEDMVFFLAELSLMDYPVVISYCPSLIAASAVYAARCTLGRSPYWTETLKHYTGYSEEQLRDCAKLMVDLHSDAPESKLRAVYKKFSSLERSAVALVTPTKNLSA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0151 431 MobiDBLite consensus disorder prediction 1 30 - -
Lal6g0151 431 SMART Cyclin_C_2 307 426 IPR004367 -
Lal6g0151 431 Gene3D - 180 421 - -
Lal6g0151 431 SMART cyclin_7 311 395 IPR013763 -
Lal6g0151 431 SMART cyclin_7 214 298 IPR013763 -
Lal6g0151 431 CDD CYCLIN 208 297 IPR013763 -
Lal6g0151 431 Pfam Cyclin, N-terminal domain 180 304 IPR006671 -
Lal6g0151 431 PIRSF Cyclin_A_B_D_E 4 431 IPR039361 -
Lal6g0151 431 Pfam Cyclin, C-terminal domain 307 424 IPR004367 -
Lal6g0151 431 SUPERFAMILY Cyclin-like 171 304 IPR036915 -
Lal6g0151 431 SUPERFAMILY Cyclin-like 308 428 IPR036915 -
Lal6g0151 431 PANTHER CYCLIN-B1-4 21 428 - -
Lal6g0151 431 Gene3D - 194 305 - -
Lal6g0151 431 CDD CYCLIN 305 394 IPR013763 -
Lal6g0151 431 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Lal6g0151 431 MobiDBLite consensus disorder prediction 1 17 - -
Lal6g0151 431 PANTHER CYCLINS 21 428 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0151 Lal-Chr6 1086047 1089143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0151 18 430 Core Cell Cycle Gene Families AT2G26760 52.758 4.84e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0151 K21777 - gmx:547782 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0151 6 1086047 1089143 Lal6g0151 6 1086047 1089143 ECH
Lal18g1490 18 16805039 16808711 Lal6g0151 6 1086047 1089143 LSH