Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0105 ATGTTTGGTGAAATGGACCAAAAGCAACAACAGAACAATAGGTGTGGCAATAATGGCATTGATGTCCCAAAATCAGTTTCACAAACCTTAAGGCGCCCACGTGGAAGGCCAGCAGGGTCTAAAAACAAGCCAAAGGCACCAATAATAGTGACAAGAGATAGTGCTAATGCACTCAAAGCACATGCAATGGAAGTGAGTTCTGGTTGTGATGTGAATGAGAGTTTGTTGAACTTTGCAAGGAGGAGGCAACGTGGCCTTTGCATACTTAGTGGTACTGGCTGTGTAACAAATGTGAAGTTGCACCAACCTGGCTCAAATGGTGCCATTGTAACCCTTCATGGAAGGTTTGAGATACTCTCATTGTTGGGGTCAATCCTTCCACCACCAGCACCAAGAGGGATCACAGGTCTCACTATTTACTTAGCTGGTGCTCAAGGCCAAGTTGTTGGAGGTGTTGTTTTTGGTGCTTTGATTGCTTCTACTCCTCTTCTCATCATGGCTGCATCATTCATGCATGCTACTTTTGATCGTCTTCCTTTGGAAGATGATCATGAAAATGCTGCTGCAATGCCCAATCAAGCTCAGCACTCAGATTTATATCCAAGGCCACACAACTTGCTCACAAATGGTGCAATGGCCCCTAAGATATACTCTTGGGCACCATCAAGGAACATGTCAAAAACTTGA 687 0.4454 MFGEMDQKQQQNNRCGNNGIDVPKSVSQTLRRPRGRPAGSKNKPKAPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRRQRGLCILSGTGCVTNVKLHQPGSNGAIVTLHGRFEILSLLGSILPPPAPRGITGLTIYLAGAQGQVVGGVVFGALIASTPLLIMAASFMHATFDRLPLEDDHENAAAMPNQAQHSDLYPRPHNLLTNGAMAPKIYSWAPSRNMSKT 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0105 228 Pfam Plants and Prokaryotes Conserved (PCC) domain 60 170 IPR005175 -
Lal6g0105 228 SUPERFAMILY AF0104/ALDC/Ptd012-like 55 185 - -
Lal6g0105 228 MobiDBLite consensus disorder prediction 1 46 - -
Lal6g0105 228 MobiDBLite consensus disorder prediction 1 25 - -
Lal6g0105 228 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 23 227 - -
Lal6g0105 228 ProSiteProfiles PPC domain profile profile. 55 191 IPR005175 -
Lal6g0105 228 Gene3D - 59 188 - -
Lal6g0105 228 PIRSF ESCAROLA 3 216 IPR014476 GO:0003680
Lal6g0105 228 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 227 IPR014476 GO:0003680
Lal6g0105 228 CDD DUF296 61 141 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0105 Lal-Chr6 656376 657062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0105 17 227 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 64.317 1.91e-86 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0105 - - gmx:100804941 325.094