Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0101 ATGATTGCGGGCTTGTGTAAAAGTTGGGTGCTTTTCGAATTGGAACAGAGGTGCATGTGGGGTTTCATTTGGATTACTGTTCTGTTATTTCTTCAAGGATTCTGGCAAGAGAATAATTTCTTCGGATTGTGGGGTTGTGATCCGGAGCAGGGGTATTATCATAGAATGCAGCAGCCAGATCAAAGAAAAAAGAGTTCAACGGAAATGGATTTTTTCTCCGAATACGGTGATGCCAACCGGTACAAAATTCAAGAAGTTGTTGGGAAAGGAAGTTATGGTGTTGTCTGTTCAGCCATTGACACTCATACTGGTGAAAAAGTAGCCATAAAAAAGATTCATGATATCTTTGAGCATATATCCGATGCTGCACGTATTCTCCGTGAGATAAAGTTGCTTAGACTTCTACGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCTCCTTCTAGGAGGGACTTTAAAGATATTTACATTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCTAATGATGACCTAACGAAAGAGCACTATCAGTTTTTTCTATATCAGTTACTTCGAGCTCTGAAGTATATTCACACCGCCAATGTCTATCATCGAGACTTGAAGCCAAAGAATATATTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAACGACACACCAACAACTGTATTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCACCAGAGCTCTGCGGATCGTTTTGCTCAAAGTATACACCAGCAATTGATATTTGGAGCATAGGTTGCATCTTTGCTGAAGTATTAATAGGAAAGCCACTTTTTCCTGGAAAAAATGTTGTCCATCAGTTAGATTTGATGACAGATTTGCTTGGGACTCCCTCACTGGATACTATATCCCGGGTACGCAATGATAAGGCCAGGAGATACCTAACTAGTATGCGGAAGAAGCAGCCCATACCGTTTGCACAAAAATTTCCCAATGCAGATCCTTTAGCACTCCGACTATTGGAAAGATTGCTTGCTTTTGATCCAAAAGACCGACCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTCTCACGAATTGAGAGGGAACCATCTTGCCAGCCTATTACGAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACAAAGGAAGAAATCCGAGAACTAATTTTCCGCGAGATTCTAGAGTACCATCCTCAACTGCTGAAAGACTACTTAAATGGAACAGAGAGAACTAATTTTCTTTATCCCAGTGCCGTGGATCAGTTCAAAAACCAGTTTGCTCATCTTGAAGAAAATGGTGGTAAAAGCAGTCCAGTCATGCCACTTGAAAGAAAGCATGGATCACTTCCCAGGTCAACAACAATTGTACATTCGAATATGGTACTGTCAAAACAACAATCAAATATTGCTTCCTCCAAAAACCATCAATCAGCTGAACAATATAATAACATTCCCAGAGATGCAGAAAACCCTGTGGCAAGGTCCATTCAGGGAATGCAAAGAATTCCATTAGCAAAACCTGGTAAAGTTGTTGGGCCAGTTGTTCCGTACGAGTATGCGACTGTCGTCAAGGATTCTTATGATCCAAGGACATTCATAAGAGGTTCTGTTCTTCCTTCCCGACCTACACCACCGACACATTATTATCAAAGATCTAGCTCTGGGAGTCAAGAAAAGCCAGCACCAATAGAAGCCGATAAGGGTGTGTCTTTACAAGCAAAACATGCTCAACAGCAATGTGGTGTCAATGCCAGAATAGTAACAGATGTAGCTATTAATATTGATACTAACCCCTTTTTCATGACAAGGGCAGGAGTGAACAAGATCGAACAAGATGATCGGATAGCTATTGACACAAACTTGATGCAGCCAAAGGCTCAATATGGTGGGATTAGTGCAACTGGTAGTGCCACTGCTCATAGAAAAGTTGGACCATGTGGAGCAAATCCTTGTAGAGAAAAAGGTGCTTTGTGTGGAGGAGTTGTAGTTTCTGATGATGATGGATTAAAAAAATTAAGAAGAAGAGATGGCGTTGGTGTGGAACGTGAAGGTGAAAGTTGGTTTGTATTTTATAAGGCCAAACAAAGGCAGTGGGGCCAGCTTCGTTGGCATTGA 2172 0.4116 MIAGLCKSWVLFELEQRCMWGFIWITVLLFLQGFWQENNFFGLWGCDPEQGYYHRMQQPDQRKKSSTEMDFFSEYGDANRYKIQEVVGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYIVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLSRIEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYLNGTERTNFLYPSAVDQFKNQFAHLEENGGKSSPVMPLERKHGSLPRSTTIVHSNMVLSKQQSNIASSKNHQSAEQYNNIPRDAENPVARSIQGMQRIPLAKPGKVVGPVVPYEYATVVKDSYDPRTFIRGSVLPSRPTPPTHYYQRSSSGSQEKPAPIEADKGVSLQAKHAQQQCGVNARIVTDVAINIDTNPFFMTRAGVNKIEQDDRIAIDTNLMQPKAQYGGISATGSATAHRKVGPCGANPCREKGALCGGVVVSDDDGLKKLRRRDGVGVEREGESWFVFYKAKQRQWGQLRWH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0101 723 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 65 550 - -
Lal6g0101 723 MobiDBLite consensus disorder prediction 553 581 - -
Lal6g0101 723 Pfam Protein kinase domain 81 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0101 723 MobiDBLite consensus disorder prediction 562 578 - -
Lal6g0101 723 CDD STKc_TDY_MAPK 80 417 - -
Lal6g0101 723 Gene3D Transferase(Phosphotransferase) domain 1 167 395 - -
Lal6g0101 723 SMART serkin_6 81 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0101 723 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 65 550 - -
Lal6g0101 723 Gene3D Phosphorylase Kinase; domain 1 96 418 - -
Lal6g0101 723 ProSiteProfiles Protein kinase domain profile. 81 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0101 723 ProSitePatterns MAP kinase signature. 116 219 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal6g0101 723 SUPERFAMILY Protein kinase-like (PK-like) 77 376 IPR011009 -
Lal6g0101 723 ProSitePatterns Protein kinases ATP-binding region signature. 87 111 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0101 Lal-Chr6 616447 624547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0101 56 520 MAP Kinase Gene Family AT2G42880 83.656 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal6g0101 Pkinase 3.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0101 - - gmx:100811788 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1535 18 17126740 17132693 Lal6g0101 6 616447 624547 LSH
Lal22g0097 22 604376 609803 Lal6g0101 6 616447 624547 LSH
Lal18g1535 18 17126740 17132693 Lal6g0101 6 616447 624547 PCT
Lal6g0101 6 616447 624547 Lal18g1535 18 17126740 17132693 PCT