Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0094 ATGGAAAGCCCCACCAATAAGCTCCAGCCTCGATTCTCGCTGAAAAGACAATCCTCTCTGATGCCGGAACCCAACAACGATGATTCCACCTACGACGGATCATCGGTTTCCGAGGCGGCGTTGGACCCGGCGGTAGGGTTGATGTATATGGCCAATGAAGGTGACTTGGACGGAATGGAGGAGCTCTTGGATTCAGGCATTGACGTCAATTACAAAGACATTGACGGTCGCACCGCTTTGCACGTCGCCTCATGTCACTCTCGCACTGATGTAGTTGACTTGTTGCTCCAACGAGGTGCCAACGTTGACCCTCAAGATCGCTGGGGCAGCACGCCTCTAGCTGATGCGATGTACTACAAAAACCATGACATTGTCAAACTTTTGGAGAAACATGGTGCAAAACCCCGGATGGCACCCTTGCATGTCAAAAGTGTTCGTGAAGTACCAGAATATGAGATTGATCCTTCTGAACTTGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTATAGTATTGCATTATGGCGTGGAATTCAAGTTGCTGTCAAAACACTGGGGGAGGAAGTGTTCACTGATGATGATAAAGTAAAAGCATTTCTTGATGAGCTTACGTTACTTCAGAAAATACGGCATCCAAATGTAGTCCAGTTTTTAGGTGCCGTAACACAAAGCACACCAATGACGATTGTCACAGAATATCTACCCCAGGGAGATCTTCGTGACTACTTGAAACGGAAAGGTGCTTTAAAACCGATAACAGCTGTTAAGTTTGCACTTGACATTGCTAGGGGGATGAATTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATACTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTCAGCAAGTTGCTTAAAGTTGCAAAAACTGTCAAAGAAGACAAACCGGTGACATCCCAGGATACGTCATGGCGCTATGTTGCTCCAGAGATCTATAGAAATGAGGAATATGACACCAAAGTGGATGTGTTTTCGTTTGGTCTGATATTGCAGGAGATGATTGAAGGTTTTCCACCTTTTTATACAAATCCAGAAAATGAAGTTCCTAAGGCTTATGTCGAAAATGAGCGACCACCATTTAAAGCTCCACCCAAGCTTTATGCTTATGGATTAAAACAGTTAATTGAAGAATGCTGGGATGAAAAACCTTCCAGAAGACCAACATTTAGGCAAATAATTGAGATATTGGAAGACACCAACTTCCATCTTGCTCAAAAAAGGGGCTGGAAGACTTGCACTCCTGCATGCATCCAGAATCTGAAGGGCCTTTTTAAGGGGTTTCGCACAAGTCCAACTAGTAAATCATCTCGCACTACAATCAGATAA 1389 0.4377 MESPTNKLQPRFSLKRQSSLMPEPNNDDSTYDGSSVSEAALDPAVGLMYMANEGDLDGMEELLDSGIDVNYKDIDGRTALHVASCHSRTDVVDLLLQRGANVDPQDRWGSTPLADAMYYKNHDIVKLLEKHGAKPRMAPLHVKSVREVPEYEIDPSELDFTNSVCITKGTYSIALWRGIQVAVKTLGEEVFTDDDKVKAFLDELTLLQKIRHPNVVQFLGAVTQSTPMTIVTEYLPQGDLRDYLKRKGALKPITAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSQDTSWRYVAPEIYRNEEYDTKVDVFSFGLILQEMIEGFPPFYTNPENEVPKAYVENERPPFKAPPKLYAYGLKQLIEECWDEKPSRRPTFRQIIEILEDTNFHLAQKRGWKTCTPACIQNLKGLFKGFRTSPTSKSSRTTIR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0094 462 SMART ANK_2a 75 104 IPR002110 GO:0005515
Lal6g0094 462 SMART ANK_2a 108 137 IPR002110 GO:0005515
Lal6g0094 462 SMART ANK_2a 42 71 IPR002110 GO:0005515
Lal6g0094 462 PRINTS Tyrosine kinase catalytic domain signature 232 245 IPR001245 GO:0004672|GO:0006468
Lal6g0094 462 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
Lal6g0094 462 PRINTS Tyrosine kinase catalytic domain signature 342 364 IPR001245 GO:0004672|GO:0006468
Lal6g0094 462 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672|GO:0006468
Lal6g0094 462 PIRSF ILK 2 440 - -
Lal6g0094 462 Gene3D - 13 150 IPR036770 -
Lal6g0094 462 Pfam Protein tyrosine and serine/threonine kinase 177 417 IPR001245 GO:0004672|GO:0006468
Lal6g0094 462 ProSiteProfiles Ankyrin repeat region circular profile. 75 107 - -
Lal6g0094 462 Pfam Ankyrin repeats (3 copies) 47 136 IPR002110 GO:0005515
Lal6g0094 462 CDD STKc_MAP3K-like 166 417 - -
Lal6g0094 462 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 12 445 - -
Lal6g0094 462 MobiDBLite consensus disorder prediction 1 36 - -
Lal6g0094 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 445 - -
Lal6g0094 462 ProSiteProfiles Protein kinase domain profile. 125 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0094 462 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Lal6g0094 462 SUPERFAMILY Protein kinase-like (PK-like) 159 418 IPR011009 -
Lal6g0094 462 SUPERFAMILY Ankyrin repeat 46 137 IPR036770 -
Lal6g0094 462 Gene3D Transferase(Phosphotransferase) domain 1 158 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0094 Lal-Chr6 567766 574670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0094 9 440 MAP Kinase Kinase Kinase AT4G18950 64.747 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lal6g0094 PK_Tyr_Ser-Thr 6e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0094 - - gmx:100795964 744.577