Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0089 ATGGAGTTGTGTTTGGGTTATTCCATGCTCCACTTTCTTTTATTTCTCATTAGTTTCACTGCGTTTATTTCCCTCTCACACTTGGCTTCTGCAGCTACACCCAAGCTCATCACTCAAGAGGTGAAGGCATTGGAAGAGATAGGGAAGAAGATTGGGAAGAAAGAGTGGGACTTTGGGGTGGACCCTTGCAATTGGAGTGTGTCTGAGTCTGATAATAGGAAAAGTTTTGAGAATTATGTGTTATGTGATTGCACCTTCAATAACAACTCATCTTGCCATGTTGTAACCATATACTTGAAGTCTCAGAACCTGTCAGGCACTCTCTCACCAGAGTTTTCCAACCTTCGTTACCTAAATGCATTGGACCTTAGTCGTAATCTCATCACTGGTTCTATACCTCAACAATGGGCTACTATGCATTTGGTTGAGCTTTCTGTCATGGGAAACAAATTATCAGGGCCATTCCCAAAAGCCCTCACCAAGATTACAACCCTCAGAAACCTGAGTATTGAAGGAAATCTATTTTCAGGCATCATTCCACCAGAGATTGGAAACTTGATTAATTTAGAAAAAATCGTTCTGTCATCAAATGCATTCACGGGAGCATTGCCAGTGGCACTTTCTAAGTTGACCAACTTGACTGATATGAGGATAAGCGACAATAATTTCTCCGGGAGGATACCCGATTTTATTAGTAAATGGACATTGGTTGAAAAGCTGCACATCGAAGGTTGCTCATTTGAGGGGCCTATACCTTCTAGCATTTCTGCCTTGACAAGCTTAAGTGATTTGAGGATAACTGACCTAAGGGGTAGTAAACTCTCTGTTTTCCCACCACTAAGTAATATGAAATCCATGAAGCAACTGATACTGAGAAAATGCAAGATTATAGGACACATCCCAGACTATATTGGGAAAATGGAAAAACTGAAAATCTTAGATTTGAGTTTCAATGGCTTGAGTGGAAAGATTCCTGAATCTTTTGCCCTACTTAAGAAGGTGGACAAAATGTATCTTACTGGGAACAAGATATCAGGGACTATACCTGACTGGGTCCTCCTTGAGAACACAAATGTTGATATCTCTTCTAATAACTTCACCTGGGATAGCTCAAGTCCACGAGGTGATTGTCAGCGAGGGAACATAAACCTTGTTGAGAGCTACTCCTCATCAGTGGATAAAGAAAGTAAGATTCATCCGTGCCTAAAAATGAACTTCCCGTGCCCTGCTTCAACTGACGACTATCGTTCCTCTGTGCACATTAATTGTGGGGGTAAGGAGGCAAACATTCATGGTCTTGATTACGATGCTGACATAGAACAAGGAGGTGCTTCAACATATTACTCCAGTCAGAATTCATGGGCTCTTAGCAGCACTGGGAACTTCATGGACAATGATATTGACTTTGATTCCTATATTGTTGTCAATACTTCTAGACTTGTCAATGTATCTGTACCAAATTCAAAACTGTACACAACAGCTCGTGTTTCTCCCCTTGCTCTCACATACTATGGCCTCTGTCTGATAAATGGAAACTACACTGTTAAGCTTCACTTTTCAGAGATTATTTTTATCAATGATAAGTCATATAACAGTATTGGAAGGCGGATATTTGATGTTTACATCCAGGGAAATTTGGTGCTGAAAGATTTTGATATCGAAAGAGAAGCTGGTGGTACTGCCAAGCCAGTTGTGAAGACTTTTAATGCTACTGTCACGCAACATACTTTGAAGATTCACTTCTATTGGGCTGGAAAGGGAACAACTGGCATACCGGATCGAGGTGTTTATGGACCTCTAGTATCTGCCATCTCAGTAGACCCTAATTTTAAACCTCCATCAAAGGATGAAAAGAGACATTATGTAACACTGGCAGTTGGCGTAGTCGCTGCTGTTGTAGTTGTTGTTCTTATTGTGCTGGGCGTCATGTGGAGGAAGGGATGGATAGGAGGCAAGGAATCTGTGTATAAAGAGCTTAGGGGCATAGATCTACAAACGGGATTATTTACTTTAAGACAAATCAAAGCAGCAACAGCAAACTTTGATGCAGCTAATAAGATTGGTGAAGGAGGATTCGGTTCTGTTTACAAGGGCCTACTATCAGATGGTACAGTAATTGCAGTAAAACAGCTCTCTTCAAAATCTAAACAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGTCTACATCATCCCAATCTTGTTAAGCTCTATGGATGTTGTGCTGAGGGAAACCAGTTGATACTGGTATATGAGTACATGGAAAATAATTGCCTATCTCGCATTCTTTTTGGGAAAGATCCAGACAGCAAATTGAAACTGGATTGGTCAACCAGGAAGACAATTTGCATTGGTATAGCCAGAGCTTTGGCTTACCTCCATGAAGAGTCCAGGATAAAAATCATACACAGAGATATAAAGGCAAGTAATGTGTTGCTTGACAAGGATTTTAGTGCCAAAGTTTCAGATTTTGGCTTGGCAAAACTTAATGAAGATGACAAAACCCATATTAGCACTCGAATTGCAGGGACAATTGGTTATATGGCTCCTGAGTACGCAATGCGTGGCTATTTAACTGACAAAGCAGACGTTTATAGCTTCGGCGTGGTTGCATTAGAGATAGTGAGCGGAAAGAGCAACACAAACTATAGGCCGGACGAGGAATTTTTTTATCTCCTTGATTGGGCATATGTTTTGCAAGAGAGAGGAAGTCTTCTGGAGCTGGTTGATCCAGATTTGGGTTCAGAGTATTCAAGTGAGGAGGCCATAATAATGCTAAATGTGGCTCTCTTATGTACTAATGCATCTCCTACACTTAGGCCATCAACGTCCCAAGCTGTGAGCATGCTTGAAGGTTGGACTGACATTCAGGATCTACTTTCTGATCCAGGATATTCAGCTGTTAGTTCCAATTCCAAAAACAGGAGTATAAGAAATCATTTCTGGCATAATCCAGGCACAACACAAAGCATTTCAGTACATAGTATATACACTGATTCCTCTAGATCACATGTTGAAACAGATGAGAGCTGCCGTCTTGTATCAGTTAGCTCTGAGTTGTGA 3072 0.4092 MELCLGYSMLHFLLFLISFTAFISLSHLASAATPKLITQEVKALEEIGKKIGKKEWDFGVDPCNWSVSESDNRKSFENYVLCDCTFNNNSSCHVVTIYLKSQNLSGTLSPEFSNLRYLNALDLSRNLITGSIPQQWATMHLVELSVMGNKLSGPFPKALTKITTLRNLSIEGNLFSGIIPPEIGNLINLEKIVLSSNAFTGALPVALSKLTNLTDMRISDNNFSGRIPDFISKWTLVEKLHIEGCSFEGPIPSSISALTSLSDLRITDLRGSKLSVFPPLSNMKSMKQLILRKCKIIGHIPDYIGKMEKLKILDLSFNGLSGKIPESFALLKKVDKMYLTGNKISGTIPDWVLLENTNVDISSNNFTWDSSSPRGDCQRGNINLVESYSSSVDKESKIHPCLKMNFPCPASTDDYRSSVHINCGGKEANIHGLDYDADIEQGGASTYYSSQNSWALSSTGNFMDNDIDFDSYIVVNTSRLVNVSVPNSKLYTTARVSPLALTYYGLCLINGNYTVKLHFSEIIFINDKSYNSIGRRIFDVYIQGNLVLKDFDIEREAGGTAKPVVKTFNATVTQHTLKIHFYWAGKGTTGIPDRGVYGPLVSAISVDPNFKPPSKDEKRHYVTLAVGVVAAVVVVVLIVLGVMWRKGWIGGKESVYKELRGIDLQTGLFTLRQIKAATANFDAANKIGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLHHPNLVKLYGCCAEGNQLILVYEYMENNCLSRILFGKDPDSKLKLDWSTRKTICIGIARALAYLHEESRIKIIHRDIKASNVLLDKDFSAKVSDFGLAKLNEDDKTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPDEEFFYLLDWAYVLQERGSLLELVDPDLGSEYSSEEAIIMLNVALLCTNASPTLRPSTSQAVSMLEGWTDIQDLLSDPGYSAVSSNSKNRSIRNHFWHNPGTTQSISVHSIYTDSSRSHVETDESCRLVSVSSEL 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0089 1023 Gene3D Phosphorylase Kinase; domain 1 651 756 - -
Lal6g0089 1023 Gene3D - 416 608 - -
Lal6g0089 1023 Gene3D Ribonuclease Inhibitor 276 389 IPR032675 -
Lal6g0089 1023 SUPERFAMILY L domain-like 82 367 - -
Lal6g0089 1023 ProSiteProfiles Leucine-rich repeat profile. 309 331 IPR001611 GO:0005515
Lal6g0089 1023 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 390 994 - -
Lal6g0089 1023 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 87 296 - -
Lal6g0089 1023 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 297 352 - -
Lal6g0089 1023 Pfam Malectin domain 418 604 IPR021720 -
Lal6g0089 1023 Pfam Protein tyrosine and serine/threonine kinase 684 897 IPR001245 GO:0004672|GO:0006468
Lal6g0089 1023 ProSiteProfiles Protein kinase domain profile. 681 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0089 1023 SUPERFAMILY Protein kinase-like (PK-like) 665 977 IPR011009 -
Lal6g0089 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Lal6g0089 1023 Gene3D Transferase(Phosphotransferase) domain 1 757 965 - -
Lal6g0089 1023 Gene3D Ribonuclease Inhibitor 204 275 IPR032675 -
Lal6g0089 1023 Gene3D Ribonuclease Inhibitor 39 203 IPR032675 -
Lal6g0089 1023 CDD STKc_IRAK 687 955 - -
Lal6g0089 1023 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Lal6g0089 1023 Pfam Leucine rich repeat 286 344 IPR001611 GO:0005515
Lal6g0089 1023 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 297 352 - -
Lal6g0089 1023 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 87 296 - -
Lal6g0089 1023 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 390 994 - -
Lal6g0089 1023 SMART serkin_6 681 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0089 Lal-Chr6 536874 546152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0089 216 1017 Receptor kinase-like Gene Family AT1G07650 65.056 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal6g0089 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0089 - - vun:114195543 1568.52