Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0078 ATGAAATTGTATTGTTACACATATATATATATATATACAAGGCAATGGGTGGAAAACATATTCACTGACGTTGAAAGAGAAGATTGTCCACCTCGACTATCCACAATCTACATAATGGAAGGTATTGTTGAGAGAAAAGTCATTCCCTCAGATAATAGTTGCCTGTTTAATGCAGTTGGATATGTTATGGATCATGACCCAACAAAGGCTTCTGAGTTGAGACAGGTTATAGCTGCCACAGTAGCAAGTGATCCACAGAATTTTTCTGAAGCATTTCTTGGGAAACCAAATGAAGAGTATTGTAGTTGGATTCTTGACCCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGAGTATTATGGACGTGAAATCGCAGCATATGATATTCAGACAACAAGATGTGATTTGTATGGCCAGGGAAAAAATTATTCTGAAAGAGTGATGCTGATTTATGATGGTCTTCACTACGATGCTTTAGCTATGTCTCCCTTTGAGGGAGCTCCTGAGGAGTTTCATCAAACCATATTTTCTGTACAGAAAGACAGAACCATTGGACCTGTTGAGGGGCTTGCTCTTAATTTTGCAAAGGAGCAACAAAGGAAAAAGAGTTACACTGACACCTCCAACTTTACTCTGCGATGCGGGGTGTGCCAGATTGGAGTAATTGGTCAGAAGGAAGCAGTGGAGCATGCTCGAGCTACAGGTCATGTTAACTTCCAAGAATATAGATGA 741 0.3995 MKLYCYTYIYIYTRQWVENIFTDVEREDCPPRLSTIYIMEGIVERKVIPSDNSCLFNAVGYVMDHDPTKASELRQVIAATVASDPQNFSEAFLGKPNEEYCSWILDPEKWGGAIELSILAEYYGREIAAYDIQTTRCDLYGQGKNYSERVMLIYDGLHYDALAMSPFEGAPEEFHQTIFSVQKDRTIGPVEGLALNFAKEQQRKKSYTDTSNFTLRCGVCQIGVIGQKEAVEHARATGHVNFQEYR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0078 246 PANTHER UBIQUITIN THIOESTERASE OTU1 44 244 - -
Lal6g0078 246 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 44 244 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Lal6g0078 246 Pfam OTU-like cysteine protease 50 136 IPR003323 -
Lal6g0078 246 ProSiteProfiles OTU domain profile. 43 165 IPR003323 -
Lal6g0078 246 SUPERFAMILY Cysteine proteinases 44 162 IPR038765 -
Lal6g0078 246 Gene3D - 32 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0078 Lal-Chr6 465711 469688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0078 39 246 C2H2 Transcription Factor Family AT1G50670 79.808 8.80e-129 361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0078 6 465711 469688 Lal6g0078 6 465711 469688 ECH
Lal22g0083 22 522551 525342 Lal6g0078 6 465711 469688 LSH