Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0075 ATGACAATTAAACCAAGGTTCCAAACTGGTGGACTTGACTCATTGCAATTTCTGCACTCAATCACATTGATCTTCTCTCTCTATAAATATATACCCCCACCCCACCTCTCCATTCTCACCATATTCCTCACTCCTAGGTTTTTGGTTAAAGTAGTGTGTGATCATCAGAAAGTGTACATGGTTGATTTGGGAATTCAGATACCTAACAGTTTTGATCCATTTGCGGAGGCGAAAGAATCAGATGCCCCAGGAGCAAAAGAGTATGTACACATCCGGATACAACAAAGGAATGGGAAGAAGAGTCTGACAACAGTGCAAGGGCTGAAGAAAGAGTTCAGCTATGAGAAGATCCTCAAAGATCTGAAGAAAGAGTTTTGTTGCAATGGGAATGTTGTGAATGATAAGGAACTTGGAAAGATTATCCAACTCCAAGGTGATCAGCGCAAGAGTGCTTCTCACTTCCTTCTTCAGGCTGGTCTTGTTAGGAAGGATCAAGTCAAGATTCATGGTTTCTAA 516 0.4147 MTIKPRFQTGGLDSLQFLHSITLIFSLYKYIPPPHLSILTIFLTPRFLVKVVCDHQKVYMVDLGIQIPNSFDPFAEAKESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVNDKELGKIIQLQGDQRKSASHFLLQAGLVRKDQVKIHGF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0075 171 ProSiteProfiles Translation initiation factor SUI1 family profile. 89 159 IPR001950 GO:0003743|GO:0006413
Lal6g0075 171 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 60 171 - -
Lal6g0075 171 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 65 171 IPR005874 GO:0003743
Lal6g0075 171 CDD eIF1_SUI1 87 170 IPR005874 GO:0003743
Lal6g0075 171 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 60 171 - -
Lal6g0075 171 Gene3D - 51 171 - -
Lal6g0075 171 SUPERFAMILY eIF1-like 52 171 IPR036877 GO:0003743|GO:0006413
Lal6g0075 171 Pfam Translation initiation factor SUI1 86 159 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0075 Lal-Chr6 440872 452958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0075 60 171 Eukaryotic Initiation Factors Gene Family AT5G54940 81.250 2.60e-66 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0075 6 440872 452958 Lal6g0075 6 440872 452958 ECH
Lal11g1069 11 14317751 14319588 Lal6g0075 6 440872 452958 PCT
Lal6g0075 6 440872 452958 Lal11g1069 11 14317751 14319588 PCT