Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0059 ATGTCAGAGCTAGATAGGCAGATAGAACAGTTGAAGAAGTGTGAGCCATTGAAAGAATCTGAAGTGAAATCCCTTTGTCTCAAAGCCATCGAAATTCTCGTTGAGGAGAGTAACGTTCAAAGGGTCGACGCCCCCGTCACGATATGCGGTGATATCCATGGTCAGTTTTATGACATGAACGAGCTTTTCAAAGTAGGAGGTGACTGCCCCAAAACAAACTATTTATTCCTTGGGGATTTTGTTGATAGAGGATATTACTCAGTTGAAACATTCTTGCTTCTGTTGGCTCTTAAGGTGAGGTACCCAGATCGGATAACACTTATTAGGGGGAATCACGAAAGCCGTCAGATCACACAGGTATATGGATTCTATGATGAGTGCCTCCGGAAATATGGTTCAACCAATGTTTGGAGATATTGTACTGATATATTTGATTACTTAAGCTTGTCTGCCCTAATTGAAAACAAGATTTTCAGTGTTCATGGTGGTCTTTCTCCTGCCATTTCAACATTGGACCAGATACGAACTATTGATCGGAAGCAAGAAGTACCTCATGATGGTGCTATGTGTGACCTCCTATGGTCAGATCCTGAAGATATTGTGGATGGATGGGGTCTGAGTCCCCGTGGTGCTGGTTTCCTATTTGGTGGCAGTGTTGTTACTTCTTTTAACCACTCCAATAATATTGACTATATATGTCGTGCTCATCAGTTGGTAATGGAAGGATATAAGTGGATGTTCAACAACCAGATAGTTACTGTCTGGTCAGCTCCAAATTATTGCTACAGATGTGGCAATGTAGCTGCAATTCTGGAGTTGGATGGAAATCTTAATAAGCAGTTTCGGGTGTTTGATGCTGCTCCACAGCTCCAGGAAGGCGAAGGTGCCTTGCCGGAATGGAGTGAAGTTCCTCTCCTATCCTCTCCTCTCCGTTGTGGGTGTGATCTCAAGTCAAATGAGTGTTAG 966 0.4317 MSELDRQIEQLKKCEPLKESEVKSLCLKAIEILVEESNVQRVDAPVTICGDIHGQFYDMNELFKVGGDCPKTNYLFLGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSTNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDGNLNKQFRVFDAAPQLQEGEGALPEWSEVPLLSSPLRCGCDLKSNEC 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0059 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 295 - -
Lal6g0059 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 108 113 IPR006186 GO:0016787
Lal6g0059 321 Pfam Calcineurin-like phosphoesterase 45 237 IPR004843 GO:0016787
Lal6g0059 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 1 295 - -
Lal6g0059 321 SMART pp2a_7 17 288 IPR006186 GO:0016787
Lal6g0059 321 SUPERFAMILY Metallo-dependent phosphatases 3 289 IPR029052 -
Lal6g0059 321 CDD MPP_PP2A_PP4_PP6 3 288 - -
Lal6g0059 321 Gene3D - 1 296 IPR029052 -
Lal6g0059 321 PRINTS Serine/threonine phosphatase family signature 45 72 IPR006186 GO:0016787
Lal6g0059 321 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
Lal6g0059 321 PRINTS Serine/threonine phosphatase family signature 107 131 IPR006186 GO:0016787
Lal6g0059 321 PRINTS Serine/threonine phosphatase family signature 142 168 IPR006186 GO:0016787
Lal6g0059 321 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Lal6g0059 321 PRINTS Serine/threonine phosphatase family signature 228 248 IPR006186 GO:0016787
Lal6g0059 321 PRINTS Serine/threonine phosphatase family signature 250 266 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0059 Lal-Chr6 354177 358062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0059 24 223 Calmodulin-binding Proteins AT5G63870 37.190 1.88e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0059 K15423 - cit:102608319 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0059 6 354177 358062 Lal6g0059 6 354177 358062 ECH
Lal22g0062 22 379509 383908 Lal6g0059 6 354177 358062 LSH