Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0053 ATGCAAGAACAAGAAGAAGATATTTGCAATACTAATAATGTTAAAGAACCTCGTCTTGTAGCCACAAAGTTGTTGGCCAGACCTCAACATGAAGGTGTTGGCGCAGTTGTCAGAAGAAGCATAGGAAGATTTGACCTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTGACTGCTCCTGCTGGATTTCCTGATCATCCACATAGAGGCTTTGAAACGGTCACATACATGTTGCAGGGAGGTATAAGACATGAAGACTTTGAAGGAAACAAGGGAAGGATAGAAGGTGGTGACATACAGTGGATGACAGCAGGAAGAGGGATAGTGCACTCAGAAATGGCAGCTACTCATGGAACCCAAAAGGGTTTGCAGTTATGGATCAACCTTGCTTCCCAACATAAGATGGTTGAACCAAGGTATCAAGAAATGTTGAGTAAAGACATAGGAGAAGGTATGAAAGATGGTATAAAGGTTAGAGTAATAGCAGGGGAAGCTCTTGGGATAAAGTCTCCAATCTACACAAGGACACCAACTATGTACTTGGACTTCTCTCTTAAACCAGGAGCACACTTACAACAACCTATACCAAAATCTTGGAATGCTTTTGTTTATGTCTTGGAAGGAGAGGGTGTCTTTGGCAACCAAAAATCTCACCCTACAAGCTCTCATCATATTCTTCTTCTTGGTTCTGGTGATGGCCTAGAGGCGTGGAACAAATCCTCTAAGCAACTTAGGTTCATTCTTGTTGGAGGTGAACCACTTGGTGAACCTGTGGTCCAATTTGGACCCTTTGTCATGAATACTCAACAAGAGATTGACCAAACAATTGATGATTTTGATAACTATGCTAATGGATTTGAGAAAGCCAGACATTGGAGTTCTGAATAG 897 0.4169 MQEQEEDICNTNNVKEPRLVATKLLARPQHEGVGAVVRRSIGRFDLKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGGIRHEDFEGNKGRIEGGDIQWMTAGRGIVHSEMAATHGTQKGLQLWINLASQHKMVEPRYQEMLSKDIGEGMKDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQPIPKSWNAFVYVLEGEGVFGNQKSHPTSSHHILLLGSGDGLEAWNKSSKQLRFILVGGEPLGEPVVQFGPFVMNTQQEIDQTIDDFDNYANGFEKARHWSSE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0053 298 CDD cupin_pirin_N 35 132 - -
Lal6g0053 298 PANTHER PIRIN-RELATED 12 298 IPR012093 -
Lal6g0053 298 Pfam Pirin 38 130 IPR003829 -
Lal6g0053 298 SUPERFAMILY RmlC-like cupins 18 296 IPR011051 -
Lal6g0053 298 PIRSF Pirin 16 296 IPR012093 -
Lal6g0053 298 Gene3D Jelly Rolls 31 283 IPR014710 -
Lal6g0053 298 CDD cupin_pirin_C 180 256 - -
Lal6g0053 298 Pfam Pirin C-terminal cupin domain 183 286 IPR008778 -
Lal6g0053 298 Gene3D Jelly Rolls 152 257 IPR014710 -
Lal6g0053 298 PANTHER OS09G0484800 PROTEIN 12 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0053 Lal-Chr6 324897 326752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0053 13 293 Calmodulin-binding Proteins AT3G59220 58.304 9.55e-123 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0053 6 324897 326752 Lal6g0053 6 324897 326752 ECH