Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0043 ATGAATGCATGGTGGATGAACTTGAAGGATAATGTTAAATGTGGAAACAAGCTCACTGATGTTATCAGGCATCCAAGAAAGTATGGCAAAGGAAGTAGCTACGTCTCAGAAAAGAGGAAAATGGACAGAAACAGTGGTGCTCTAATGGAAACTCCTGCTAGCCAAGTACTTTCCAGGCCAAGCAACACACTTGCACAGCTTCATGAACTCAGTATTGAAGAACCTTCAAGAAAAATTGTTGAGATGATCTTTGAGAAAGCTTGGATGAACATCTCAAAACAACTAAAGAATGTTAGAACAGTCCTGAGGGTGAGTTACTCAGCAGAAGTACTTGAAAGGTTTGAAAAGTACAGAGAGAAAGTGAAGAAGAATGCGTGCCAGCGATATCCAAGGCATCCAAGGAGCACAGTTGATGGAAATGAATTGTTGCGGTTGTATGGAACGACAATGAGATGTTTCCATGGGAATAATTCTGCAAATAAAGTTTATGATTTCTGTAAAGATCCATCTTGTTGTCTTTGCCAAATAATTCAATTCAATTTCAAAGTGGAATATGCTGAGATACAATTCAATACAAGTGACAAGCAGTTATGTGCAACTCCAAGAGTAAAGAATTTGAAAAGAGCTGCAATAGTTTGCAGGGTAATTGCCGGAACTGTGGGAAATGAAGTTGATGGTGAATATGAATGGTCTGACTCAACTTGTTTAGGAGAAATGCAATTTAGCTTAGCAAAATTTGTAGTACAAAATCCAATTTCTATACTTCCCTGCTTTGTAATAATTTTCAGCTGA 792 0.3788 MNAWWMNLKDNVKCGNKLTDVIRHPRKYGKGSSYVSEKRKMDRNSGALMETPASQVLSRPSNTLAQLHELSIEEPSRKIVEMIFEKAWMNISKQLKNVRTVLRVSYSAEVLERFEKYREKVKKNACQRYPRHPRSTVDGNELLRLYGTTMRCFHGNNSANKVYDFCKDPSCCLCQIIQFNFKVEYAEIQFNTSDKQLCATPRVKNLKRAAIVCRVIAGTVGNEVDGEYEWSDSTCLGEMQFSLAKFVVQNPISILPCFVIIFS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0043 263 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 263 - -
Lal6g0043 263 PANTHER NUCLEIC ACID-BINDING PROTEIN 2 263 - -
Lal6g0043 263 SUPERFAMILY ADP-ribosylation 67 263 - -
Lal6g0043 263 Gene3D - 65 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0043 Lal-Chr6 289947 291318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0043 69 261 C2H2 Transcription Factor Family AT5G54630 33.333 5.14e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0043 - - gsj:114384928 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0043 6 289947 291318 Lal6g0043 6 289947 291318 ECH
Lal18g1605 18 17524203 17525230 Lal6g0043 6 289947 291318 LSH