Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0041 ATGTTGTTTGTTTCCCTCGTGCACTCTCATACTGGTTTTCTCCTTAAACCCATTTTCCTTCATGGTTTATCTGCTTCCTTTCATCTACTGTTACTATTTTTAGTTCTAGTGCCATGGGTTTGGAATAAGTTCACAGTAGGAGCTAGACACGACTCTAAGGAGAAATCCAAAGACACCTTTTTGAAAAAGTCCATTTTTTGTTCCCTGGGTGCTTCTGTCTTTAATCTTGTTCTCTTTCTTTTTAATTGCTTCTTTTGGTATAGAAGTGGTTGGTCAGACGAAAAGGTCGTTACCCTTTTGGATTTGGCACTCAAAACAGTCGCGTGGGGTGTTGTTTGTGTATGCTTGCATAGGCAAATCATCTCCTTCTTGTGTTCAGGTGAAAAAAGATTTTCATCCTTCTTCAGAACTTGGTGTGTTCTCTATCTCTTTATTTCATGTTATTGCCTTGTAGTGGACATTATTCTTCTCTATGAAAAACATGTCGTATTACAAGTTCAGCACTTGGTTTCTGATGTAGTATCCACTTGTGTTGGGTTATTCTTCTGTTACTTGGGCTACCTTGTCAAAAATGAGGGTGGTGATAGTAGTACTCTTCAGGAACCTCTTTTGAATAGTCATAGTGATACCAATGTCAGCAATGGGTTAGGGTCAAAAGAGACCAATGGGGATAACACTGTTACCCCTTTCTCAAGTGCTGGAATTTTCAGCACTCTTACCTTCTCTTGGGTGGGTCCTCTTGTAGCTGTTGGCAATAAGAAGACCTTGGACCTTGAAGATGTGCCCCAACTTGACAACAGAGATAGTGTAGTTGGAGCATTTCCAACTTTTAGAGACAAGCTCGAGGCAGATTGTGGTGCAATTAACAGTGTGACCACACTTAAGCTGGTGAAAGCATTATTATTCTCAGCATGGAAAGAGATTCTTTTCACAGCTTTTCTCGCATTATTGAACACACTGGCTTCATATGTTGGTCCTTATCTCATTGATTCATTTGTGCAATACCTTGATGGACAACGACTATTTGAAAATCAGGGGTATGCATTGGTTTCTGCATTCTTTTTTGCAAAGATTGTAGAGTGTCTGTCACAAAGGCATTGGTTCTTTAGGCTGCAGCAAATTGGAATTAGAATCCGGGCGGTACTTGTGACAATGATTTATAATAAAGCCTTGACCCTTTCTGGTCAGTCAAGGCAGGGCCACACTTCCGGGGAAATAATCAATTTCATGTCTGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTACTTGCATGATTTGTGGATGGTAGTTCTGCAAGTTACGCTGGCCTTGTTGATTTTGTATAAAAACCTTGGCCTTGCATCAATTGCTGCTTTGGTTGCAACTATTCTTGTAATGTTGGCAAACTTTCCCTTGGGTTCATTGCAAGAGAAGTTTCAAAGTAAGTTGATGGAGTCAAAAGATACAAGAATGAAGGCAACATCTGAGATTTTAAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTGTCTAAGATAAATGAGCTCAGAAACACTGAGCAAAGCTGGTTGAAAAAATATCTTTATACTTCAGCCATGACCACTTTTGTGTTTTGGGGTGCCCCCACATTTGTCTCAGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCACTCGAATCAGGGAAGATCTTGTCCGCGCTTGCAACATTCAGGATTCTTCAAGAGCCCATTTATAATCTTCCAGATACAATTTCAATGATTGCACAAACTAAGGTTTCTCTTGACAGGATTTCATCGTTCCTTCGACTTCAGGATTTGCAGGCTGATGTTGTAGAGAGGCTTCCTCCGGGTAGTTCCAATTCAGCAATTGAAATAGCTGATGGAAATTTCTCATGGGATTTATCTTCAGCTAATACAACACTGAAAAACATAAATGTCACAATTTCTCATGGCATGAGGGTTGCTGTTTGTGGTACAGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTATGTTAGGAGAAGTGCCAAAGGTATCAGGAATCCTGAAGGCCTGTGGGTCAAGGGCATATGTTGCTCAATCACCATGGGTACAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTAAGGAAATGGATAGGGAAAGGTATGAGAAGGTACTTGAAGCCTGTTCCCTCAAGAAGGATCTGGAGATTTTGTCATTTGGTGATCAGACCGTTATAGGAGAGCGTGGAATAAATTTGAGTGGTGGGCAGAAGCAAAGAATACAAATTGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGCTTGCTGGGCCTTTTAAGTTCGAAGACTGTAGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAAGATGGGAAAATTACTCAATGTGGGAAGTATGCTGATCTGCTTAACAGTGGAACTGATTTTATGGAACTAGTTGGTGCGCATCAACAAGCATTGTCTGCACTTAATTCGCTAGATGGTGGGGCTGTATCTAGTGAAATAAGTACCTTGGAGCAAGATGTAAATGTCTCTGGTGTGCTTGATGTTAAAGAAAAAAATGGAAACAAAGACATGCAAAATGATAAAACAGATAACAAAAATGAGGCAATAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAGAAAGGTAGAGTTGGGCTTTCAGTGTATTGGAGTTATATCACAACAGCATTCGGAGGAGCTCTTGTGCCATTCATATTGTTGGCTCAGATTCTGTTTCAAGCTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCCATCTCATCAGATGTAGATGCACCTGTTAAAGGAACAACTCTTATAACAGTCTATGTTGGTTTGTCCATTGGAAGTTCTTTCTGCATCCTTGTCAGAGCAATGTTTCTTGCCACAGCTGGTTATAAGACAGCTACTATACTCTTCAGTAAGATGCACCACTGCATTTTCCGTGCCGCCATGTCGTTTTTTGATTCCACTCCAAGTGGTCGAATCCTTAACAGAGCTTCTACTGACCAAAGTGCAGTGGATACAGACATTCCTTTTCAAATTGGTTCCTTTGCCTTCTCATTGATCCAGCTTTTCGGAATTATTGCAGTGATGTCTCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCTGTCATAGCAATCAGCATCTGGTATCAGCAATATTATATACCATCGGCACGAGAGCTATCGCGTTTAGTTGGAGTGTGCAAGGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGTACATCAACTATTAGAAGCTTTGATCAGCAGTCAAGATTTCAAGAATTAAATATGAAACTGACTGATGGATATTCTCGGCCCAAGTTCAATATTGCTGGCGCTATGGAGTGGTTGTGCTTCCGCCTAGATATGCTGTCTTCTATTACATTTGCCTTTTCTTTGATATTCTTGATATCTATTCCACAGGGAGTCATAGAACCAGGCATGCATTGCTGGTTTAGCTGTTACCTATGGACTTAA 3600 0.4058 MLFVSLVHSHTGFLLKPIFLHGLSASFHLLLLFLVLVPWVWNKFTVGARHDSKEKSKDTFLKKSIFCSLGASVFNLVLFLFNCFFWYRSGWSDEKVVTLLDLALKTVAWGVVCVCLHRQIISFLCSGEKRFSSFFRTWCVLYLFISCYCLVVDIILLYEKHVVLQVQHLVSDVVSTCVGLFFCYLGYLVKNEGGDSSTLQEPLLNSHSDTNVSNGLGSKETNGDNTVTPFSSAGIFSTLTFSWVGPLVAVGNKKTLDLEDVPQLDNRDSVVGAFPTFRDKLEADCGAINSVTTLKLVKALLFSAWKEILFTAFLALLNTLASYVGPYLIDSFVQYLDGQRLFENQGYALVSAFFFAKIVECLSQRHWFFRLQQIGIRIRAVLVTMIYNKALTLSGQSRQGHTSGEIINFMSVDAERVGVFSWYLHDLWMVVLQVTLALLILYKNLGLASIAALVATILVMLANFPLGSLQEKFQSKLMESKDTRMKATSEILRNMRILKLQGWEMKFLSKINELRNTEQSWLKKYLYTSAMTTFVFWGAPTFVSVVTFGTCMLIGIPLESGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRISSFLRLQDLQADVVERLPPGSSNSAIEIADGNFSWDLSSANTTLKNINVTISHGMRVAVCGTVGSGKSTLLSCMLGEVPKVSGILKACGSRAYVAQSPWVQSGKIEDNILFGKEMDRERYEKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNSGTDFMELVGAHQQALSALNSLDGGAVSSEISTLEQDVNVSGVLDVKEKNGNKDMQNDKTDNKNEAIGQLVQEEEREKGRVGLSVYWSYITTAFGGALVPFILLAQILFQALQIGSNYWMAWATPISSDVDAPVKGTTLITVYVGLSIGSSFCILVRAMFLATAGYKTATILFSKMHHCIFRAAMSFFDSTPSGRILNRASTDQSAVDTDIPFQIGSFAFSLIQLFGIIAVMSQVAWQVFIVFIPVIAISIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQELNMKLTDGYSRPKFNIAGAMEWLCFRLDMLSSITFAFSLIFLISIPQGVIEPGMHCWFSCYLWT 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0041 1199 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal6g0041 1199 CDD ABCC_MRP_domain1 623 823 - -
Lal6g0041 1199 Pfam ABC transporter transmembrane region 309 576 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal6g0041 1199 Pfam ABC transporter transmembrane region 936 1178 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal6g0041 1199 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Lal6g0041 1199 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Lal6g0041 1199 CDD ABC_6TM_ABCC_D2 934 1189 IPR044726 GO:0140359
Lal6g0041 1199 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 92 1189 - -
Lal6g0041 1199 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 92 1189 - -
Lal6g0041 1199 SUPERFAMILY ABC transporter transmembrane region 921 1197 IPR036640 GO:0005524|GO:0016021
Lal6g0041 1199 Gene3D ABC transporter type 1, transmembrane domain 288 604 IPR036640 GO:0005524|GO:0016021
Lal6g0041 1199 Gene3D ABC transporter type 1, transmembrane domain 896 1189 IPR036640 GO:0005524|GO:0016021
Lal6g0041 1199 SUPERFAMILY ABC transporter transmembrane region 298 597 IPR036640 GO:0005524|GO:0016021
Lal6g0041 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 619 845 IPR027417 -
Lal6g0041 1199 SMART AAA_5 650 823 IPR003593 -
Lal6g0041 1199 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1189 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal6g0041 1199 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Lal6g0041 1199 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Lal6g0041 1199 Gene3D - 605 857 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0041 Lal-Chr6 276924 284621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0041 623 852 Calmodulin-binding Proteins AT2G36910 29.600 1.72e-23 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0041 6 276924 284621 Lal6g0041 6 276924 284621 ECH
Lal22g0057 22 341954 348071 Lal6g0041 6 276924 284621 LSH