Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0026 ATGTTATCTCTCCCACCTCCACCCTCATCAAGTACTCAACTTTCATTGGATTTAGAAGCATCAAATTATGTTACCAATTACAAGTCAAGTAGGACACTAACACTTAGGCAACCTACACCTGAAAGGACCAAGCCAATCATATGGTGTGCTGCAGTGTTGTGCCTCATATTCAGCCTTTTACTTATCTTCTCTGGAGTTATGACTTTAATCTTCTACCTTGCCATCAAACCAAAAAATCCCATATTTGACATTCCAAATGCAACACTCAATATGGTACACTTTGACTCAACACAGTACTTCAATGGTGACTTCACTCTCCTCACAAATTTCTCCAACCCCAACAGAAGAATTGATATGAAGTTGGAGTCTTTGGATATTGTGCTTTTATTCTCAGAAAGAATCATATCATCACAGTCAATGAAGCCTTTTACTCAGAATGCAAGGAAAAGCAGGTTGCAAATAGTGAACTTGATATCCAGCTTGGTGTTTTTGCCACAAGATGTTAGTGTCAAACTTCAAAGGCAGGTGCAAAGCAACAAGGTGGTGTACAACGTAAGAGGGACATTTAAGGTTAGAGTGAATCTTGGTCTCATTCATTGGTCTTATTGGCTGCATAGTAGATGCCAGATTCAGATGACTGCTCCTCCAACTGCTGTTCTAATATCAAGACAATGCATAACAAAAAGATGA 690 0.3913 MLSLPPPPSSSTQLSLDLEASNYVTNYKSSRTLTLRQPTPERTKPIIWCAAVLCLIFSLLLIFSGVMTLIFYLAIKPKNPIFDIPNATLNMVHFDSTQYFNGDFTLLTNFSNPNRRIDMKLESLDIVLLFSERIISSQSMKPFTQNARKSRLQIVNLISSLVFLPQDVSVKLQRQVQSNKVVYNVRGTFKVRVNLGLIHWSYWLHSRCQIQMTAPPTAVLISRQCITKR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0026 229 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 25 229 - -
Lal6g0026 229 Pfam Late embryogenesis abundant protein 111 208 IPR004864 -
Lal6g0026 229 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 25 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0026 Lal-Chr6 201541 202230 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0026 - - pvu:PHAVU_008G282100g 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g0756 3 6514791 6515555 Lal6g0026 6 201541 202230 PCT
Lal6g0026 6 201541 202230 Lal3g0756 3 6514791 6515555 PCT