Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0024 ATGTCTACTTCTTCTTCTCCTTCAACTCCTGATCATGATGCCAATCCTGGTGGTCCTGATATTCCTGGCCCTAGTACCAGGAGAACTAGTGCTGCTGATTTTGAACCTGGCCCTTCTTCCTCTCGTCAACGTCTTATGAATGAAGCTTTACCTGAACCTGTTGTTGAAATATTGGCTCATCAAGTTGCCATTGATGCTGCTCATGATAATGGTCGCCTCTCAGCTGCTTCTGCTCTTGCCATTATATTTCAGGTTTGTTGTACGTGGCGAGAGGTATCGCGCTCGGATCACCTGTGGCAGCGCCTCACTAGACAAATCTGGCGCCGCACTCATCTATTGAGAGCCACGTGGCATCACGAGTTCATCTACTGGCATCGAACGGTCAGGAATTTCACAACTGGGAGACACTCCTTTACCATCCCACATTTTGATCCCTCCGGCAGTGGTGACCACCGTCATACCCTCATCTGCCGCTCCCTTGCCCTCTCAGACCGCCACCTTGCTTGTGGCTTCGCCGATGGCACCATCCGCCTCTTTGACGTAGATACATGGAGCCACGTCAGCACCTTCCGGTCCATGCATGGACACCGGTTCGGCCCATTCTCGCGGTGTGTCTCCGGTATAGTGATGACAAATAATTCCATCCTGGCGTTTGGAAGACTTGATGGAGACATCTACGTGGCAGTTTTAAACGAGCCTGGGCTCGCTCGCCGGGCCGTAGTTGGTGACGTGGTAAACAATGGTGTGTTAGTTGAATTGGCAGGCACAGCCCGTAGGTGGGTGGGCTTATTTGCTGGAGTTCCGGGCCGCGCTTTTCAGATATGGGACTCGCAAACGGAACAGGTGATTTCAGTTGGAGGGTCATTAACCGACCCGGATGCGTTGATGGGTTGGCACATGTTAACAGAGTTAGTTGAATCGGTTGGTCGAATAAGAGTAAGTGAATGCGAGTTGGTTGTAGCGTGCACTACTTCCAGGCTCGTTTGTTTCAACATAATGAACCCAGAGTTATTGTTGCATGATGTGGGGTCCACGTCTGGGTTTGTTGTGACGTCGCTAGACGTGACTCACGAGGCTTTTGTTGTTATAGAGAGAAACGGAATTGGAACGGTTCGTCGAACCGGTTCATTCGCGCGGGTGAGCCGGTTCAGGGTTCGGGGCTCGTGGGTGCGGGGCCTCTTGGGCTGCATCTGCCCAGGGTTCGTGACCACCTACTCAGGTGGTGGTGTGCTTAGGGTTTGGAACATAGAACAACCTGTGGGAATGTTGTGTTGCACAATTGCAATTAGGTTGGGTGAAGGGAACAGCATGGTGGCTAATCAGAGACATGTTGCCATTTCTTGGAATGACACTTCCATACACTTATTAGATTTTGGTGTATAG 1383 0.5119 MSTSSSPSTPDHDANPGGPDIPGPSTRRTSAADFEPGPSSSRQRLMNEALPEPVVEILAHQVAIDAAHDNGRLSAASALAIIFQVCCTWREVSRSDHLWQRLTRQIWRRTHLLRATWHHEFIYWHRTVRNFTTGRHSFTIPHFDPSGSGDHRHTLICRSLALSDRHLACGFADGTIRLFDVDTWSHVSTFRSMHGHRFGPFSRCVSGIVMTNNSILAFGRLDGDIYVAVLNEPGLARRAVVGDVVNNGVLVELAGTARRWVGLFAGVPGRAFQIWDSQTEQVISVGGSLTDPDALMGWHMLTELVESVGRIRVSECELVVACTTSRLVCFNIMNPELLLHDVGSTSGFVVTSLDVTHEAFVVIERNGIGTVRRTGSFARVSRFRVRGSWVRGLLGCICPGFVTTYSGGGVLRVWNIEQPVGMLCCTIAIRLGEGNSMVANQRHVAISWNDTSIHLLDFGV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0024 460 PANTHER WD40 REPEAT PROTEIN 12, 37 1 459 - -
Lal6g0024 460 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 1 459 - -
Lal6g0024 460 MobiDBLite consensus disorder prediction 1 44 - -
Lal6g0024 460 Gene3D - 105 374 IPR015943 GO:0005515
Lal6g0024 460 SUPERFAMILY WD40 repeat-like 152 454 IPR036322 GO:0005515
Lal6g0024 460 SUPERFAMILY F-box domain 72 133 IPR036047 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Lal6g0024 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0024 - - gmx:100781108 582.408