Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0023 ATGGAAGCAAACAAAGAGGAGGCACTTAAGGCAATAGAGAATGCTGAGAAGCGATTTGCTCTGAGGGACTTTGCTGGTGCAAAAAGCTATGCTTTGAAGGCTAAAACCCTTTGTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACGTTTGAAGTTTACATTGCTTCTGAGGTCAAACATAATGGTGAATTGGACTATTATTCAATTCTCGGATTAAAACCTTTGGCTGATACACAGGCTGTGAAGAGACAGTATAAGAAGTTGGCAGTGTTGCTTCATCCAGATAAGAACAAATGTGTGGGAGCTGATGGGGCTTTTAAGCTTGTTTCTGAGGCATGGACTTGGCTTTCAGACAGTGCTATGCACAGTTCTTACAATATCAAGAGAAGTGCACAGTTTGGCGGGATTATTCACAAAAATATGTCTTCTGTTCATGCTACTGGTTATAACAAATGTTCCAATTCGTCAACATCTCATGGCGGGCTTGACACCTTTTGGACAATTTGCACCTCTTGCAATGTTCAATATGAGTATCTGCGCAAGTATGTGAATAAAAAACTTTCATGTAAGAACTGCCGTGCCACTTTTGTTTCTGTTGAAACTGGGGCAGCCCCAGCAAATGGTTCATTCCCATATTGCCCTTGGACATATATGCAAGGAAATGGGTATGGAAGCCATTCATATGACGGAGTTACGTATGTTCCAACCAGTGCCACCTATATCAATGACAATGGAGTCACAGGATACCATTCTGGGCATGGATATGAGTATGTTTCAAATGTTTCATTTCAGTGGGACTCTGCTGGACTTGTCAATCAAAATGGTTCAACTACCGTATCTGCTGGTTCTGTTCATCACGTCAATGGAAATTTGAAGAGGGGAAGGCCAAAAGTCAAATCTGGAGTTGATGGAAGGCATCACGTTGCTGAGACCGTGGTCACTATAAACTCAGATGTACCGTTCTCCTGCATTAAACCAGCAGAAGTTAAGCTAAGTAGACCTGATAAGAAACGGAAAGTTGTTGTGGGAGCTGGTTTCAGAAATGGCCCTGAAGACAAGGGGTCAAAATGTGCTTCAGAATCATTATTGGCTAATGGAGATGAAAGCACTGGACAAGGCCAGAAGCTTTCCTACACAAGTGAAGTTCAAACCAAACAGTGTACCATGGCACCGGCATTTGACGCGAGAAAGTTATTGATTGAGAAAGCCAGGACAGAAATTAGGAAGAAGCTGGAAGAGATGAAGTTATCATTGTCTAAAGCTGCTGATGTTAATGAGAAAGAAAAACCACAAGCTGAAGATGGTCAAGTCAAAAGAGAGACATGTAGAAGAACAGTTCTGAATGTTTCTGGGCATCAATTAGAGCATGGGAAAACTGCTCCAGTCTCAATTACTGTCCCCGATCCCGACTTTCATGACTTTGATAAAGATAGGTCCGAGGAGTGCTTTAAGCCGAAGCAAGTATGGGCACTATATGATGAGGAAGATGGAATGCCGCGCCTGTATTGTCTGATCCGTGAGATTATCTCTGTGAATCCATTTAAGATTCATATTAGTTACCTGGGCTCCAAAACTGATAGCGAGTTTGGTTTAGTAAACTGGATTGATTCAGGTTTTACGAAATCTTGTGGAAATTTCAGGGCTGTGAATTCTGATGTTGTTGAGCAAGTTAACATTTTTTCTCATGTTCTAAGCAAGGAGAAAGCTGGTCGAGGAGGATGCATTCGCATATATCCTCGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACAAGATTGGGACAGATCTACTCCCGATGAAGTGAGGCATAAATATGAAATGGTGGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTTCACCTCTTATTAAATTAGCTGGATTTAAAACGGTGTATAAGGTGAATACAGACAAAAGCACCATTCAATGGATACCAAGAAGAGAAATGTTGCGTTTTTCGCACCAAGTTCCTTCTTGGTTGCTGAAGGGTGAAGAGGCAAGCAATTTGCCAGAAAGGTGTTGGGATCTTGATCCAGCTGCGACTCCAGATGAACTTCTTCATGCTGCTACTACAGAAGCAAAGGCTTTGTAG 2109 0.422 MEANKEEALKAIENAEKRFALRDFAGAKSYALKAKTLCPGLEGISQMVATFEVYIASEVKHNGELDYYSILGLKPLADTQAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAMHSSYNIKRSAQFGGIIHKNMSSVHATGYNKCSNSSTSHGGLDTFWTICTSCNVQYEYLRKYVNKKLSCKNCRATFVSVETGAAPANGSFPYCPWTYMQGNGYGSHSYDGVTYVPTSATYINDNGVTGYHSGHGYEYVSNVSFQWDSAGLVNQNGSTTVSAGSVHHVNGNLKRGRPKVKSGVDGRHHVAETVVTINSDVPFSCIKPAEVKLSRPDKKRKVVVGAGFRNGPEDKGSKCASESLLANGDESTGQGQKLSYTSEVQTKQCTMAPAFDARKLLIEKARTEIRKKLEEMKLSLSKAADVNEKEKPQAEDGQVKRETCRRTVLNVSGHQLEHGKTAPVSITVPDPDFHDFDKDRSEECFKPKQVWALYDEEDGMPRLYCLIREIISVNPFKIHISYLGSKTDSEFGLVNWIDSGFTKSCGNFRAVNSDVVEQVNIFSHVLSKEKAGRGGCIRIYPRSGDIWAVYRNWSQDWDRSTPDEVRHKYEMVEVLDDYSEELGVCVSPLIKLAGFKTVYKVNTDKSTIQWIPRREMLRFSHQVPSWLLKGEEASNLPERCWDLDPAATPDELLHAATTEAKAL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0023 702 PANTHER BNAC03G44070D PROTEIN 1 695 - -
Lal6g0023 702 Pfam Domain of unknown function (DUF3444) 464 671 IPR024593 -
Lal6g0023 702 Gene3D DnaJ domain 55 146 IPR036869 -
Lal6g0023 702 CDD DnaJ 66 119 IPR001623 -
Lal6g0023 702 SMART dnaj_3 65 122 IPR001623 -
Lal6g0023 702 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lal6g0023 702 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lal6g0023 702 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lal6g0023 702 PANTHER BNAC03G44070D PROTEIN 1 695 - -
Lal6g0023 702 SUPERFAMILY Chaperone J-domain 61 122 IPR036869 -
Lal6g0023 702 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lal6g0023 702 Pfam DnaJ domain 66 127 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0023 Lal-Chr6 164567 166675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0023 4 298 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.616 2.27e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0023 - - gmx:100792639 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0035 22 237368 239479 Lal6g0023 6 164567 166675 LSH