Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1824 ATGAAGAAAGTGGCTTCATCTATTATAGTTTCCTTTCTTATTTGTGCGATTTTGGTGCTTAAGGTTTCTGCCAATGCGGAAGGTGATGCCCTAAATACATTGAAAAGCAACTTGGTTGATCCTAACAATGTTCTTCAAAGTTGGGATGCTACCCTTGTCAATCCCTGCACTTGGTTTCATGTTACTTGCAATGGTGATAATAGTGTGACCCGTGTCGATCTTGGAAATGCAGACCTTACGGGTCAACTGGTTCCCCAACTTGGTCAGCTCTCAAATTTGCAGTACTTGGAGCTTTATAGCAATAATATAAGTGGAAAAATCCCAGATGAGATTGGAAATTTGACAAACTTGGTGAGCTTGGATCTTTACTTGAACAAGTTAAATGGTCCTATACCGAATACACTGGGCAAACTTGCAAATCTGCGTTTCCTGCGTCTTAATAACAACAGTTTGTCAGGAGGCATTCCGATGTCTTTGACAGCCGTTACTTCCCTGCAAGTTCTTGATCTCTCAAACAACCAGCTTAAAGGAGTAGTACCAGTGAATGGTTCATTTTCACTATTTACTCCCATCAGTTATTCAAATAATTCTGGATTGAAACAACCAAATAACACTCCTTCTGCGCCACTTTCTCCACCGGCAGCAACATCTTCAGGTAATAGTGCCACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCCCTGTTGTTTGCAGCACCTGCAATCGCCCTTGCATATTGGCGCAGAAGGAAACCTCAGGACCATTTCTTTGATGTTCCTGCTGAGGAGGATCCAGAAGTTCACCTTGGTCAGCTCAAAAGGTTTTCTCTGCGTGAGCTGCAAGTTGCTACAGATAACTTTAGTAACAAACACATTCTTGGTAGAGGTGGATTTGGGAAGGTTTATAAAGGGCGCTTAGCTGATGGCACTCTTGTAGCAGTAAAAAGACTTAAGGAGGAACGCACGCAGGGTGGGGAGCTGCAGTTTCAAACAGAAGTCGAAATGATCAGCATGGCAGTGCATCGTAATTTGCTTCGCCTCCGTGGTTTTTGCATGACACCTACTGAAAGGTTGCTTGTGTATCCTTACATGGCTAATGGAAGTGTAGCATCATGTTTACGAGAACGTCAGAATGGTGATCCTCCACTGGATTGGCCAATAAGGAAGAGTATTGCACTGGGTTCTGCTAGGGGGCTTGCTTATTTGCATGATCACTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCTGCAAATATATTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAGACTTATGGATTACAAGGATACCCATGTTACTACTGCGGTACGTGGTACAATTGGGCATATAGCACCAGAGTACCTCTCAACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTCGATCTAGCTCGACTCGCAAATGATGATGATGTCATGTTGCTTGACTGGGTTAAAGGACTACTGAAAGACAAGAAGTTGGAAATACTGGTTGATGCAGATTTACAAGGAAATTATGATGATGATGAGGTAGAGCAGTTAATCCAAGTGGCCTTACTATGCACACAAGGCTCACCTGTAGAAAGACCAAAGATGTCCGAGGTTGTCAGAATGCTAGAAGGCGACGGTTTGGCCGAAAAATGGGAGCAATGGCAGAAAGAGGAGACGTTCCGACAAGATTTTAATCACATTCATCACCCAAATGCAAATTGGATAGTAGACTCAACTTCACATATCCAACCAGATGAACTATCAGGTCCTAGATGA 1836 0.4314 MKKVASSIIVSFLICAILVLKVSANAEGDALNTLKSNLVDPNNVLQSWDATLVNPCTWFHVTCNGDNSVTRVDLGNADLTGQLVPQLGQLSNLQYLELYSNNISGKIPDEIGNLTNLVSLDLYLNKLNGPIPNTLGKLANLRFLRLNNNSLSGGIPMSLTAVTSLQVLDLSNNQLKGVVPVNGSFSLFTPISYSNNSGLKQPNNTPSAPLSPPAATSSGNSATGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKHILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERQNGDPPLDWPIRKSIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLEILVDADLQGNYDDDEVEQLIQVALLCTQGSPVERPKMSEVVRMLEGDGLAEKWEQWQKEETFRQDFNHIHHPNANWIVDSTSHIQPDELSGPR 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1824 611 Gene3D Transferase(Phosphotransferase) domain 1 365 582 - -
Lal5g1824 611 SMART serkin_6 288 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1824 611 Pfam Protein kinase domain 289 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1824 611 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Lal5g1824 611 ProSiteProfiles Protein kinase domain profile. 288 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1824 611 SUPERFAMILY Protein kinase-like (PK-like) 267 563 IPR011009 -
Lal5g1824 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lal5g1824 611 MobiDBLite consensus disorder prediction 198 219 - -
Lal5g1824 611 ProSiteProfiles Leucine-rich repeat profile. 164 185 IPR001611 GO:0005515
Lal5g1824 611 Gene3D Ribonuclease Inhibitor 23 208 IPR032675 -
Lal5g1824 611 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Lal5g1824 611 Pfam Leucine Rich Repeat 92 114 IPR001611 GO:0005515
Lal5g1824 611 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 611 - -
Lal5g1824 611 PANTHER BNAA08G11770D PROTEIN 12 611 IPR031048 GO:0004675|GO:0005102|GO:0006468
Lal5g1824 611 SUPERFAMILY L domain-like 27 194 - -
Lal5g1824 611 Gene3D Phosphorylase Kinase; domain 1 257 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1824 Lal-Chr5 20021846 20027740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1824 18 611 Receptor kinase-like Gene Family AT4G33430 77.640 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal5g1824 Pkinase 6.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1824 K13416 - gmx:100800522 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1824 5 20021846 20027740 Lal3g0029 3 162839 168281 LSH