Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1822 ATGAGTCAGCGTGTCAGCGACGAGGTTGTGGCAATGGCTATGGGGGAACTAAGAAGTGGACATTCTTCGAGTAGACATGTTGAAACGTTGCCATATGTTCACAAGGTTGGATCTCCTCCTAAACAAACTCTTTTCCAAGAGATCAAACATTCTGTGAAGGAAACTTTCTTCTCAGACAACCCTTTAAAGGAGTTTAAGGACCAAACCATAAGAAGAAAGTTTGTTCTAGGCCTGCAAGCAGTATTCCCTATTTTCAATTGGGCAAGAGGTTACAACCTTAAAGCATTCAGAAGTGATTTCATTTCTGGACTAACCATTGCAAGTCTTTGTATTCCTCAGGACATTGCATATGCAAAGCTGGCAAATTTGGAGCCTCAATATGGACTATATACTAGCTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCGATAGGACCAGTAGCAGTGGTGTCCCTCTTGCTCGGGACTATGCTTAGCGATGAGATTAAGGACTACCATAGCCATGAATACCTACGTCTTGCATTGACTGCTACCTTCTTTGCAGGAATTACTCAAATGGCACTTGGAGTTTTAAGGCTTGGTTTCTTGATTGACTTCCTATCTCATGCTGCCATCGTCGGATTCATGGCTGGCGCAGCCATTACTATTGCGCTGCAACAGCTGAAAGGTCTGCTTGGCATAAAAAACTTCACTAAGAAAACTGACATTATTTCTGTCATGGACTCAGTTTGGAGTTCAGTGCACCATGGGTGGAACTGGCAGACAATAGTGATAGGAATATCATTCTTGGTCTTTCTTCTTATAACCAAGTATATTGCTAAAAGGGAAAAGAAACTCTTTTGGGTGGCTGCAATTGCTCCTATGACCTGTGTCATACTGTCTACCCTTTTTGTTTACATTACCAGGGCTGACAAGAAAGGCGTATCAATAGTGAAACATATTAAAAAAGGTGTGAATCCAGCATCTGCTAGTGAAATATTTTTCAGTGGAAAATATTTGAGCGCAGGTGCTCGAATTGGTGTGGTAGCTGGCATGGTTGCACTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTTGATGGTAACAAAGAAATGGTGGCTCTAGGAACAATGAACATTATTGGTTCACTGACATCATGTTATGTAGCTACAGGATCATTTTCTCGCTCAGCAGTGAACTATATGGCTGGTTGTAAAACCGCTGTATCAAACATTGTTATGGCCCTTGTTGTACTATTAACTCTATTAGTCATTACACCACTGTTTAAGTACACACCAAATGCAGTGCTAGCTTCTATTATAATAGCTGCTGTATTAGGCCTTATCGACATTCAAGCTGTAATTCTGCTATGGAAGATAGATAAATTTGACTTTTTAGCTTGCATGGGAGCTTTCTTTGGTGTGATCTTCAAAAGTGTTGAGATTGGCCTTCTAATTGCGGTTGCAATATCTTTTGCTAAAATCCTTTTACAAGTGACAAGACCAAGGACTGCAGTACTTGGGAAGCTTCCAGGGACTAGTGTTTACAGGAACATCCAGCAATATCCAAAAGCAACCCAGATTCCTGGCATGCTCATTATCAGAGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGACTGATGAAGAGACTCAAAGGACAGGAAGTGAATTAGCCGCAATACAGTATCTTGTGGTTGAAATGTCGCGTAAGGCTTTCGATGAAATCAACTCCTACTTTTTCAATGATTATTTTTTATCAATGAATTTATTTGTGGAACCATATATTCTTGCAGCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTGGAAGAGTTATATAAGAGCCTTCATAAAAGGGAAGTGCAGCTTGTGTTAGCAAACCCGGGACCAATTGTGATGGAGAAGCTCCATGCATCCAACTTAACTGACTTAGTTGGAGAACATAAAATATTTCTATCAGTGACTGATGCTGTTGCAACTTTTGTTACAAAGGGTTCAGAATTATAA 2061 0.4061 MSQRVSDEVVAMAMGELRSGHSSSRHVETLPYVHKVGSPPKQTLFQEIKHSVKETFFSDNPLKEFKDQTIRRKFVLGLQAVFPIFNWARGYNLKAFRSDFISGLTIASLCIPQDIAYAKLANLEPQYGLYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTMLSDEIKDYHSHEYLRLALTATFFAGITQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGIKNFTKKTDIISVMDSVWSSVHHGWNWQTIVIGISFLVFLLITKYIAKREKKLFWVAAIAPMTCVILSTLFVYITRADKKGVSIVKHIKKGVNPASASEIFFSGKYLSAGARIGVVAGMVALTEAVAIGRTFAAMKDYSLDGNKEMVALGTMNIIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMALVVLLTLLVITPLFKYTPNAVLASIIIAAVLGLIDIQAVILLWKIDKFDFLACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTSVYRNIQQYPKATQIPGMLIIRVDSAIYFSNSNYIKERILRWLTDEETQRTGSELAAIQYLVVEMSRKAFDEINSYFFNDYFLSMNLFVEPYILAAVTDIDTSGIHALEELYKSLHKREVQLVLANPGPIVMEKLHASNLTDLVGEHKIFLSVTDAVATFVTKGSEL 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1822 686 ProSiteProfiles STAS domain profile. 527 679 IPR002645 -
Lal5g1822 686 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Lal5g1822 686 CDD STAS_SulP_like_sulfate_transporter 528 672 - -
Lal5g1822 686 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 613 685 - -
Lal5g1822 686 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 586 - -
Lal5g1822 686 SUPERFAMILY SpoIIaa-like 529 679 IPR036513 -
Lal5g1822 686 Pfam STAS domain 613 675 IPR002645 -
Lal5g1822 686 Pfam STAS domain 528 585 IPR002645 -
Lal5g1822 686 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Lal5g1822 686 TIGRFAM sulP: sulfate permease 83 675 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal5g1822 686 Gene3D STAS domain 522 682 IPR036513 -
Lal5g1822 686 PANTHER SULFATE TRANSPORTER 19 586 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal5g1822 686 PANTHER SULFATE TRANSPORTER 613 685 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1822 Lal-Chr5 20008414 20012459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1822 15 685 Inorganic Solute Cotransporters AT1G22150 68.899 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1822 K17470 - gmx:100784124 1052.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1822 5 20008414 20012459 Lal11g0072 11 482243 486260 LSH