Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1798 ATGAAACTGAATCTCAAGCTTTGTTTCCTTATGGTACAGCAGAAAATAATGAATTCTAAAGGTGTCACTGAAGATTGCCTAGGATGGGCAGCAAGAGATGCATCTGGAGTTCTTTCACCTTACAAATTCAGTCGCAGGGCTGTTGAGGATGATGATGTTTATGTTAAAATTACACACTGCGGTGTTTGTTACGCCGATGTAATTTGGACAAGGAATCATCATCATGACTCAAAGTATCCTCTTGTGCCTGGACATGAGATTGCTGGGATTGTGACAAAGGTTGGTTCCAATGTGCACCGTTTCAATATTGGTGACCATGTTGGAGTAGGAACTTATGTCAACTCATGCAGGGATTGTGAGTATTGTAATGACCAAGTAGAAGTTAATTGTGTCAAAGGATCAGTTTTTACTTTTAATGGTGTTGATTATGATGGTACAATTACAAAAGGAGGCTATTCCAGTCACATAGTTGTCCATGAAAGGTATTGCTTTGTTATACCCAAAAGCTATCCATTGGCTTCAGCAGCTCCTTTGCTTTGTGCTGGAATTACAGTTTATTCTCCCATGATACGCCACAAGATGAATCAACCTGGTAAATCTCTGGGAGTGATTGGTCTTGGAGGCCTCGGTCACATGGCAGTGAAATTTGGGAAGGCATTTGGATTGAATGTAACAATTTTGAGTTCTAGCATATCCAAGAAAGAGGAGGCCCTGAATCTGCTTGGTGCAGACAAATTTGTATTATCATCTGATCAAGACCAAATGAAAGCATCGGCTAAGTCACTGGACTTCATAATTGACACAGCATCCGGTGATCATCCTTTTGATCCTTACATGTCACTGTTGAAGACATATGGTGTTTTTGTCCTAGTTGGGTTCCCAAGTGTAATCAAATTCAGCCCTGGAAACCTTAATATAGGAATGAAAACCTTAGCTGGAAGTATTACAGGTGGCACAAAAGATATACAACAGATGATTGACTTCTGCGCTGAAAAAGAGATTTATCCGAACATAGAAGTAATTCCAATCGAGTATGCGAATGAAGCTCTTGAGAGGGTCGTAAATAAGGATGTGAAATATCGGTTTGTGATTGATATTGAGAACTCCTTGAGAGCATAA 1119 0.3995 MKLNLKLCFLMVQQKIMNSKGVTEDCLGWAARDASGVLSPYKFSRRAVEDDDVYVKITHCGVCYADVIWTRNHHHDSKYPLVPGHEIAGIVTKVGSNVHRFNIGDHVGVGTYVNSCRDCEYCNDQVEVNCVKGSVFTFNGVDYDGTITKGGYSSHIVVHERYCFVIPKSYPLASAAPLLCAGITVYSPMIRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTILSSSISKKEEALNLLGADKFVLSSDQDQMKASAKSLDFIIDTASGDHPFDPYMSLLKTYGVFVLVGFPSVIKFSPGNLNIGMKTLAGSITGGTKDIQQMIDFCAEKEIYPNIEVIPIEYANEALERVVNKDVKYRFVIDIENSLRA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1798 372 Pfam Alcohol dehydrogenase GroES-like domain 51 164 IPR013154 -
Lal5g1798 372 PANTHER - 23 370 - -
Lal5g1798 372 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 334 IPR036291 -
Lal5g1798 372 SMART PKS_ER_names_mod 36 364 IPR020843 GO:0016491
Lal5g1798 372 SUPERFAMILY GroES-like 32 199 IPR011032 -
Lal5g1798 372 CDD CAD1 28 365 - -
Lal5g1798 372 Gene3D - 181 336 - -
Lal5g1798 372 Pfam Zinc-binding dehydrogenase 208 330 IPR013149 -
Lal5g1798 372 PANTHER ALDEHYDE REDUCTASE 23 370 - -
Lal5g1798 372 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 84 98 IPR002328 GO:0008270|GO:0016491
Lal5g1798 372 Gene3D - 29 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1798 Lal-Chr5 19891494 19897237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1798 18 371 Monolignol Biosynthesis Gene Families AT1G72680 76.836 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1798 K00083 - gmx:100807617 639.032