Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1788 ATGTTCCTCCGAGGAATTTTGGGGCGGTCGCCGCCTACTATGCTCACTATTTTGTTTTTCCTCTGCCTTTTAACCTCAACTCATTCAAGTGAGGTTCAATCACTTATGAAGCTTAAGTTCTCTGTCCAGAGTTCAAATGAAAATCTTTTCAGTTCTTGGACACAAGCAAATTCTCCATGCAACTTCACAGGGATTGTGTGCAATACTAATGGTTTTGTTTCAGAAATCAACCTTGCAGATAAACAACTAGTTGGAACTCTTCCTTTTGATTCAATTTGCACACTTCAATCACTTGAAAAAATCTCTTTGGGGTCCAACTTCTTGCATAGAAGCATAAATGAGGAGTTGAGAAATTGCACCAACTTGAAGTACTTGGATTTGGGAGGGAATTCATTTTATGGAGCAGTGCCTGATTTGTCAAGTTTGAACAAGTTGCAATACTTGAACTTAAATGCAAGTGGAATCTCTGGAGCATTTCCATGGAAATCATTGGAGAATCTAACAAGTCTCTCCTTCTTGAGCCTTGGTGATAACTTGTTTGAAAAATCTCTTTTCCCTCTTGAGGTCTTAAAGCTTGACAAATTGTCTTGGCTTTACTTAGCAAATTGCAGCATCACTGGTAATATTCCATTTGGTATTGGAAACCTCACTCATCTTGAGAATCTTGAACTTTCTGATAACCATTTGTATGGTGAGATTCCTGCTGATATTGTAAGGCTTCACAAGCTTTGGCAACTTGAACTTTATGACAACAATTTGAGTGGGAAAATTCCAGTTGGATTTGGCAACCTTGTCAATCTTGTTAACTTTGATGCTTCTTCTAATCACCTTGAAGGTGATCTTTCTGAGCTAAGGTCCTTGACAAACCTTGCATCACTGCAGCTTTTTCAGAACCAACTCACAGGAACAATTCCACAAGAGTTTGGAGATTTCAAAAACCTTACTGAAATTTCCCTTTATGATAACAAGCTCACTGGTTCTCTTCCACAAAATCTTGGCTTTTGGAAAGGTTTGGAGTTCATAGATGTTTCAGATAATTCACTTTCTGGTCATATACCACTTGACATGTGCAAGTACAACCAAATAGATGAGCTATCATTGTTAAACAACAGCTTCACTGGAAGTATACCGGAAACATATGCAAATTGCACATCTTTGCAACGTTTTCTCGTTAATCGTAATTCACTTTCAGGTGTTGTTCCTTCAGGTATATGGAGCTTGCCAAATCTGAAACTTATTGATCTTTCAATGAACAAGTTTGAAGGTTCAATAGCATCTGGTATTGGTAAAGCAAAACTTCTTGCTCAACTGTTTTTATCTGATAATAAGTTCTCAGGTGAGTTACCTTTGGAAATCTCAGAAGCTTCTTCATTGGTATCTATTCAGCTAAGTTCAAATCAAATTTCTGGTCACATACCAGAAATGATTGGAAACTTGAAGAAACTAACTAGTCTTGATTTGAATAACAACAATCTTTCTGGTATTATACCATTCTCTATTAGTTCTTGTATTTCTCTAAATGAAATAAACCTTGCTGGTAACTCTCTTTATGGGGAAATACCTTCTAGTATTGGATCTCTACCTACCCTCAACTCATTGAACTTGTCCTCCAATAAACTCTCTGGTGAAGTTCCATCAAGTTTATCGCCTCGTACGCTTAGCCTTCTCGATTTATCAAACAACAAGTTATTTGGTTCAATACCAGAACCACTAGCTATTTCAGCTTTCAGAGATGGTTTCATGGCAAATCCTGGCTTATGCAGCCAGACTTTGAAAATTTTCCAGCCATGTTCATTGGAATCAGGCAACTCGAGAAGTCACAGAGCCCTTCTACTATGTTTGATGGCTGTTTTTATGCTTATGCTTCTTTCTTCAGCATACTTCCTCTTCATGAAACTGAACCATAACAAGTTTGAGAAGCCACTCAAGACTAATTCTTGGGATGTCAAGCAGTACCACATGCTAAACTTCAATGAGAATGAAGTTATTCATGGGATCAAGGATGATAATTTGATTGGTAGCGGAGGATCAGGGAATGTTTACAAGATTGTGCTTAAAAGTGGTGCAGAATTCGCAGTGAAACACATATGGACTTCAAATCAAAGCGATCGCGGAAGTTGCAGGAGCAGCTCGGCTATGCTTAAAGGGAGTTCAAGGTCACCTGAGTTTGATGCAGAAGTGGCCACTCTCAGCTCTATAAGGCATGTTAATGTGGTGAAGCTCTACTGTAGCATCACAAGTGAAGATAGTAATCTTCTTGTTTATGAGTTGTTACCAAATGGAAGCTTGTGGGACAAGTTGCATACTTGTAATAAGACGATAAAGATGGGGTGGGAGGTTAGGTATGACATTGCTCTTGGATCTGCTAGAGGATTGGAGTATCTGCACCATGGGTGTGATAGACCAGTTATACACAGGGATGTCAAGTCTAGTAACATATTGCTTGATGAGGAATGGAAGCCAAGAATTGCTGATTTTGGGCTTGCCAAGATTGTGCAAGGAGGTGCAGGCAATTGGACCCATGTCATTGCTGGAACACTTGGATATATGGCCCCTGAGTATGCCTACACTGCTAAAGTGACAGAGAAGAGTGATGTTTACAGCTTTGGGGTAGTCCTAATGGAGCTGGTAACAGGGAAGAGGCCTATTGAGGCAGAGTTTGGAGAGAACAAAGACATTGTGTGTTGGGTATGCAACAATATGAGTAGCAGCAAAGAAAATGCTATTGTTCAATTGGTGGACTCTACCATTTCAAAACATTTCAAAGAAGATGCAATGAAGGTGTTGAGAATAGCAACATTATGCACTGCCAGAATCCCATCTTCGAGACCATCGATGAGAATGGTTGTTCAAATGCTGGAAGAGACAGAGCCATGTACTCTATCCAACATAGTTGTTACCATAGATGATTAA 2913 0.3931 MFLRGILGRSPPTMLTILFFLCLLTSTHSSEVQSLMKLKFSVQSSNENLFSSWTQANSPCNFTGIVCNTNGFVSEINLADKQLVGTLPFDSICTLQSLEKISLGSNFLHRSINEELRNCTNLKYLDLGGNSFYGAVPDLSSLNKLQYLNLNASGISGAFPWKSLENLTSLSFLSLGDNLFEKSLFPLEVLKLDKLSWLYLANCSITGNIPFGIGNLTHLENLELSDNHLYGEIPADIVRLHKLWQLELYDNNLSGKIPVGFGNLVNLVNFDASSNHLEGDLSELRSLTNLASLQLFQNQLTGTIPQEFGDFKNLTEISLYDNKLTGSLPQNLGFWKGLEFIDVSDNSLSGHIPLDMCKYNQIDELSLLNNSFTGSIPETYANCTSLQRFLVNRNSLSGVVPSGIWSLPNLKLIDLSMNKFEGSIASGIGKAKLLAQLFLSDNKFSGELPLEISEASSLVSIQLSSNQISGHIPEMIGNLKKLTSLDLNNNNLSGIIPFSISSCISLNEINLAGNSLYGEIPSSIGSLPTLNSLNLSSNKLSGEVPSSLSPRTLSLLDLSNNKLFGSIPEPLAISAFRDGFMANPGLCSQTLKIFQPCSLESGNSRSHRALLLCLMAVFMLMLLSSAYFLFMKLNHNKFEKPLKTNSWDVKQYHMLNFNENEVIHGIKDDNLIGSGGSGNVYKIVLKSGAEFAVKHIWTSNQSDRGSCRSSSAMLKGSSRSPEFDAEVATLSSIRHVNVVKLYCSITSEDSNLLVYELLPNGSLWDKLHTCNKTIKMGWEVRYDIALGSARGLEYLHHGCDRPVIHRDVKSSNILLDEEWKPRIADFGLAKIVQGGAGNWTHVIAGTLGYMAPEYAYTAKVTEKSDVYSFGVVLMELVTGKRPIEAEFGENKDIVCWVCNNMSSSKENAIVQLVDSTISKHFKEDAMKVLRIATLCTARIPSSRPSMRMVVQMLEETEPCTLSNIVVTIDD 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1788 970 SUPERFAMILY Protein kinase-like (PK-like) 658 955 IPR011009 -
Lal5g1788 970 SMART LRR_typ_2 311 335 IPR003591 -
Lal5g1788 970 SMART LRR_typ_2 95 119 IPR003591 -
Lal5g1788 970 SMART LRR_typ_2 287 310 IPR003591 -
Lal5g1788 970 SMART LRR_typ_2 407 431 IPR003591 -
Lal5g1788 970 SMART LRR_typ_2 527 555 IPR003591 -
Lal5g1788 970 SMART LRR_typ_2 479 502 IPR003591 -
Lal5g1788 970 SMART LRR_typ_2 216 240 IPR003591 -
Lal5g1788 970 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Lal5g1788 970 Pfam Leucine rich repeat 457 516 IPR001611 GO:0005515
Lal5g1788 970 Pfam Protein kinase domain 668 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1788 970 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 10 963 - -
Lal5g1788 970 SUPERFAMILY RNI-like 284 568 - -
Lal5g1788 970 SMART serkin_6 666 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1788 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Lal5g1788 970 Gene3D Transferase(Phosphotransferase) domain 1 758 963 - -
Lal5g1788 970 Gene3D Phosphorylase Kinase; domain 1 649 757 - -
Lal5g1788 970 ProSiteProfiles Leucine-rich repeat profile. 481 502 IPR001611 GO:0005515
Lal5g1788 970 PRINTS Leucine-rich repeat signature 482 495 - -
Lal5g1788 970 PRINTS Leucine-rich repeat signature 527 540 - -
Lal5g1788 970 SUPERFAMILY L domain-like 22 359 - -
Lal5g1788 970 Gene3D Ribonuclease Inhibitor 360 473 IPR032675 -
Lal5g1788 970 Gene3D Ribonuclease Inhibitor 474 596 IPR032675 -
Lal5g1788 970 SMART LRR_sd22_2 311 334 - -
Lal5g1788 970 SMART LRR_sd22_2 264 292 - -
Lal5g1788 970 SMART LRR_sd22_2 167 189 - -
Lal5g1788 970 SMART LRR_sd22_2 95 116 - -
Lal5g1788 970 SMART LRR_sd22_2 119 144 - -
Lal5g1788 970 SMART LRR_sd22_2 479 500 - -
Lal5g1788 970 SMART LRR_sd22_2 216 248 - -
Lal5g1788 970 Gene3D Ribonuclease Inhibitor 30 138 IPR032675 -
Lal5g1788 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 10 963 - -
Lal5g1788 970 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Lal5g1788 970 Gene3D Ribonuclease Inhibitor 139 359 IPR032675 -
Lal5g1788 970 ProSiteProfiles Protein kinase domain profile. 666 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1788 Lal-Chr5 19804655 19808697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1788 16 967 Receptor kinase-like Gene Family AT1G09970 57.039 0.0 1052
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal5g1788 Pkinase 8.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1788 - - gmx:100811489 1449.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1788 5 19804655 19808697 Lal5g1788 5 19804655 19808697 ECH
Lal5g1788 5 19804655 19808697 Lal11g0109 11 712933 718751 LSH