Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1779 ATGCTTCCGAAGCCTAACATGGCTTCCCGCAACCAGAACCGGCCTCCTCGCAGCCCCTCCAATAGAAAGGTAGGTACAGGAGAAGTTCCTTCAGACAAGCGTAGAAGGATTGTTGGGACACGAGGAAGGGCTGCACTTGGTGCAATCAGCAACAAGCCAGATGATGTTGCTAATACCGAAGCCTCCGAATGTGGCACTGTTGTTGACTTCACAAGTGATGAAGTTGAGGCACTTCTCAATCAAAGAATGAAAAAGGGGAATTCTTATGATAAGAAAGAAATGGATCACAGGGCAGATCTTGTTAAGAGTTTAAAGAATTGCGTTAGGTGGTATAAAAGGGTTGAAGAAGGGTATATCCAGGAAATGGAAAAGCTCCAGATTGAACTTCAATCTGCTGAGAAGAAGTGCATTGACACCGAGACTGAGATGAGGAATAAGATAGAGGAGTTGAATGAGACTATATCTAATCTGAGGATGACAATTTCCTCTTTAGAAGAGAGAATTGAAAAGGAAGAATCAGATAAATTGGAAGCAATAGATTGTTATAGAAAAGAAAAGGAAGCTAGAAGTTTGGCTGAGAAGATGCAAGCTTCTCTTTCAACTGAGCTTGAGAAAGTTCGAGATGAGAAATCAGCTGCTGAGCGGAAGGCTAATTCAAATGAGGATTTGTATAAGAGATCACAAGAGTATAATATGAGTCTGCAGCAGTACAACAGTCGCCTTCAGTCAGATCTAGAAACCACTAATGAGGCACATAAACGACTGGAAACAGAGAAAGCGACCATTGTTGAGAATCTTAGCAATGTAAGAGCCCACAATAAAGCATTGCAGGATCAGTTGGCATCTCTTAAGGTTTCACAAGATGAGGCTTCAAAGCAGAAAGAGATGTTGGTAAATGATCTGAATTGCCTCCGCGAAGAATTAAAACAAATTAGAGATGATCGTGATCGCCAATTGGGACAAGTGCAAGCTTTAAGCGGAGAAATTACAAAATGCAAAGAATATACAGGGAAATCAGTTGCCCAATTGGATACCTTGACTATTAAAACAAATGCTCTTGAGGAAACTTGTTCTTACCAGAGGAATGAAATTTTTAAGTTGCAGCAGCAATTGACTGCTGAAAAGGACAAGTCAAAGATGGCTAATTTATCTGCTTCAGAAACTAGAATAGTGTTTGAAGATCAGCAAAGGATCATACATGAATTACAAGAAAGATTGGCAGAAAAAGAATCCCAAGTAATCGAAGGAGAGAAATTAAGGAAAAAGTTGCACAACACTATCCTGGAGCTAAAAGGAAATATTCGTGTGTTTTGTCGTGTGCGACCTTTGCTACCGGATGATTCTACTGGAACAGACATGGTTGTTTCTTACCCTACGTCAACAGAAGATCTTGGCCGGGGCATTGAATTGCTACAAAGTGGGCAGAAGTATCCATTTACATTTGACAAAGTATTCAATCATGACGCTTCTCAGCAAGATGTTTTCACAGAGATATCACAGCTGGTACAAAGTGCGCTTGATGGGTACAAGGTCTGTATATTTGCTTATGGACAGACAGGTTCAGGCAAGACATATACGATGATGGGTAGACCTAATGCCTCAGATCTGAAAGGGTTGATTCCACGTTCTTTGGAACAGATTTTCCAGATTAGCCAGTCCCTGGAAGATCAAGGGTGGAAGTACAAAATGCAGGCTTCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTGGCAAATCGGTCTGGTGGTATTGACCCAACACGAACAGAAAATGGTGTTCCTGGAAAGCAGTATACTATTAAACACGACGTTAATGGAAACACACAAGTTACAGACCTCACTATAGTGGATGTTTGTAGTGTAAATGAGATTTCCTCTCTCCTGCAAAAGGCTGCACAAAGCAGGTCGGTAGGAAGAACGCAGATGAACGAACAGTCTTCACGAAGCCACTTTGTCTTTACTTTGCGTATATGCGGGACTAATGAGAACACTGGACAACAGGTTCAAGGGGTGCTAAATTTGATTGATCTAGCTGGAAGTGAGAGACTGTCAAGGAGTGGGGCAACTGGGGACCGTTTGAAGGAAGCTCAGGCTATCAACAAAAGTCTTTCCTCTTTGAGTGATGTCATATTTGCATTGGCAAGGAAAGAGGAGCATGTTCCTTTTAGGAATTCAAAACTGACATACCTTCTTCAGCCATGCCTTGGTGGGGATTCTAAAACTCTGATGTTTGTGAACATCTCACCTGACCCATCCTCAACCGGCGAGTCACTTTGTTCCCTTCGATTTGCTGCCAGAGTCAACTCATGTGAGATTGGCATTCCAAGGCGTCAGACATCGACAAAGTCCTTTGATTCTTCTCGTTTGAGCTATGGCTAA 2385 0.4193 MLPKPNMASRNQNRPPRSPSNRKVGTGEVPSDKRRRIVGTRGRAALGAISNKPDDVANTEASECGTVVDFTSDEVEALLNQRMKKGNSYDKKEMDHRADLVKSLKNCVRWYKRVEEGYIQEMEKLQIELQSAEKKCIDTETEMRNKIEELNETISNLRMTISSLEERIEKEESDKLEAIDCYRKEKEARSLAEKMQASLSTELEKVRDEKSAAERKANSNEDLYKRSQEYNMSLQQYNSRLQSDLETTNEAHKRLETEKATIVENLSNVRAHNKALQDQLASLKVSQDEASKQKEMLVNDLNCLREELKQIRDDRDRQLGQVQALSGEITKCKEYTGKSVAQLDTLTIKTNALEETCSYQRNEIFKLQQQLTAEKDKSKMANLSASETRIVFEDQQRIIHELQERLAEKESQVIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDSTGTDMVVSYPTSTEDLGRGIELLQSGQKYPFTFDKVFNHDASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPNASDLKGLIPRSLEQIFQISQSLEDQGWKYKMQASILEIYNETIRDLLANRSGGIDPTRTENGVPGKQYTIKHDVNGNTQVTDLTIVDVCSVNEISSLLQKAAQSRSVGRTQMNEQSSRSHFVFTLRICGTNENTGQQVQGVLNLIDLAGSERLSRSGATGDRLKEAQAINKSLSSLSDVIFALARKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSTKSFDSSRLSYG 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1779 794 MobiDBLite consensus disorder prediction 1 20 - -
Lal5g1779 794 Gene3D Kinesin motor domain 375 774 IPR036961 -
Lal5g1779 794 SMART kinesin_4 431 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g1779 794 MobiDBLite consensus disorder prediction 1 38 - -
Lal5g1779 794 MobiDBLite consensus disorder prediction 202 223 - -
Lal5g1779 794 ProSiteProfiles Kinesin motor domain profile. 433 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g1779 794 Coils Coil 238 265 - -
Lal5g1779 794 Pfam Kinesin motor domain 439 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g1779 794 MobiDBLite consensus disorder prediction 202 225 - -
Lal5g1779 794 PANTHER KINESIN-LIKE PROTEIN 41 794 - -
Lal5g1779 794 Coils Coil 115 174 - -
Lal5g1779 794 ProSitePatterns Kinesin motor domain signature. 672 683 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal5g1779 794 Coils Coil 273 321 - -
Lal5g1779 794 CDD KISc_C_terminal 431 774 - -
Lal5g1779 794 Coils Coil 392 419 - -
Lal5g1779 794 PANTHER KINESIN-LIKE PROTEIN KLP-3 41 794 - -
Lal5g1779 794 PRINTS Kinesin heavy chain signature 508 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g1779 794 PRINTS Kinesin heavy chain signature 642 659 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g1779 794 PRINTS Kinesin heavy chain signature 673 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g1779 794 PRINTS Kinesin heavy chain signature 722 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal5g1779 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 771 IPR027417 -
Lal5g1779 794 Coils Coil 196 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1779 Lal-Chr5 19748754 19754877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1779 405 784 Calmodulin-binding Proteins AT5G65930 39.075 2.88e-77 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1779 K10405 - gmx:100808278 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1779 5 19748754 19754877 Lal11g0114 11 772903 778908 LSH
Lal15g0570 15 3952515 3959318 Lal5g1779 5 19748754 19754877 PCT
Lal5g1779 5 19748754 19754877 Lal15g0570 15 3952515 3959318 PCT