Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1777 ATGGAGTATGGAGTTGAAGATTGGCTATGTGGTGATATAGAAGAGTCTGAAAATGGAAGGATGGGTAGAAAGAGGGAGTATAATGATGAGATAAGAGAGTACAAATCCAAGAACCTTGAGACTGAAAGAAGAAGGAGGGAGAAGCTAAGTACTAGGCTCTTAATGCTGCGATCTTTAATGAATAAAGCAACCATTATTGATGATGCCACCACTTACATTAAGGAGCTACAAAGCAAAGTTGAAAGTCTCACCCAAGAGCTTCACCAAATGGAAGCAACTTATTCAGATGAAAAAACAGTGAAAAATGTAGATGAAGTTGAAGTTGCTGAAGATATCAATAAATGGGAGATACAGGCATATTATTCTCTTAATTTAAGAGGGGTAAGGTTGGCACAAATTGATACTAATAAACTATGGGTGAAGATCATCATTGAGAACAAAAGGGGAAGTTTCAAGAAATTAATGGAGGGCATGAATATTTTGGGCTTTGAGCTCTTAGATACCAATCTGATAAAAACAAAAGGAGCATTGTTCATTGAAGGTTGCATGCAGGTCACTTTAGGAAAGGGTGCAGATGGTGAAAGACTTTCAGTTCATCAAATCAAGAAGTATCTGCAAGATATTATTAGTGAGAAATAG 639 0.3678 MEYGVEDWLCGDIEESENGRMGRKREYNDEIREYKSKNLETERRRREKLSTRLLMLRSLMNKATIIDDATTYIKELQSKVESLTQELHQMEATYSDEKTVKNVDEVEVAEDINKWEIQAYYSLNLRGVRLAQIDTNKLWVKIIIENKRGSFKKLMEGMNILGFELLDTNLIKTKGALFIEGCMQVTLGKGADGERLSVHQIKKYLQDIISEK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1777 212 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 21 211 - -
Lal5g1777 212 Gene3D - 30 103 IPR036638 GO:0046983
Lal5g1777 212 Coils Coil 24 44 - -
Lal5g1777 212 SMART finulus 39 82 IPR011598 GO:0046983
Lal5g1777 212 PANTHER TRANSCRIPTION FACTOR DYT1 21 211 - -
Lal5g1777 212 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 94 IPR036638 GO:0046983
Lal5g1777 212 Coils Coil 66 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1777 Lal-Chr5 19744182 19745076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1777 17 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 36.364 1.89e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1777 - - gmx:100793107 217.624