Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1770 ATGGATAACTCAAGCATTATAGCATCATCTGGAAATGTAACAGACAAATCATTAATATGTTACACACCAGCTATGACAACAACCAATGGATTATGGGAAGGAGATAACCCTTTAGAATATTCTCTTCCTCTCTTCATTCTTCAATTAACCTTAGTTGTCCTCTCTACACGTTTCTTTGTCTTCATCCTCAAGCCATTTAACCAACCCCGTGTCATTGGTGAAATCATGGGTGGACTATTGTTGGGGCCATCAGTGCTGGGAAGAAATGAAGAATTTGCATCTAAAGTATTCCCTCTAAAAAGTGTAATGGTGATAGAAACAATGGCAAGCATGGGTCTAATATATTTCCTCTTCCTAGTTGGGTTAGAGATGGACATTTCTGTTGTGAAACGCACTGGAAAAAAGGCTGTGTCAATAGCAATTGCTGGAATGATATTGCCCTTTATCCTTGGTATTTTCTTCTCTTTTTTCTTAGATGAACACCATTTACATATGAGCAGAGCCAGTCTTGTACTCTACATTGGTGTTGCTTTATCTGTAACTGCATTCCCCGTGCTAGCTCGCATACTCGCTGAGCTAAAGATCATAAACACAGAACTTGGCAAGCTTGCACTCTCAACTGCTCTCATCAATGATATGTGTGCATGGATTTTGCTGGCTCTAGCTATTGCCTTATCTGAGAAGAATAGTGTTAACACATGGGCTTCAGTTTGGGTTGTGTTAACAAGTGGTGTTTTTGCTACTTTTTGCTTTGTTGTTGTTAGACCTGGAATCTCATGGATGATAAGGAAAACACCAGAAGGACAACCTTTCAGTGAGTTCCAAATATGCTTTGTACTCACTGGTGTTATGATCTCAGCCTTCATTACAGATGTTATTGGAACACATTCTGTTTTTGGAGCTTTTATATATGGCCTTGTAATTCCAAATGGTCCACTTGGAGCTACTATAATAGAAAAACTTGAAGACTTTGTTTCAGGGCTTTTACTACCTCTCTTTTTCGCCCTTAGTGGGCTTAAGACTGATATCAGCTTAGTCAAAGGTGCAAATAGATGGTTTGGTGCACTCATGGTGGTTCCTCTTGCTTGTATTGGCAAGATCATCGGAACTCTACTTATATCGATGCTTTTCCAGATACCAACTCGTGAAGGTGTTATCCTTGGTTTACTTATGAACACTAAAGGCCTTGTTGAGATGATTGTGCTCAATGTTGGGAGGGAACAAAAGGTCTTGGGTGATGAAATATTTTCAATTATGGTGGTTGTAACACTTGTAATGACAGCACTTATTTCACCCATTGTGACATTGATTTATAAACCAAGGAAAAGGCTCATACCTTACAAAAAAAGAACAATGCAAAATTCAAGACTTGATGCAGAGTTAAGAGTGCTGGTGTGTGTTCATGTTCCTAGAAATGTACCTACAATAATTAATCTCCTTGAAGCAACTCACCCAAGCAAAAAGTCTCCAATATGTGCTTATGTGCTCCACTTAGTTGAACTCACTGGTAGAGCTTCTGCCATGCTCATTGTCCATGCCAGTAGAAAATCCGACCGACCAGCCCTGAACAAAACACAAGCACAAACAGACCACATCATCAATGCATTTCAGAACTTTGAGGAGCAAATTGGTTATGTCTCAGTCCAACCCTTGACAGCAGTTTCACCTTACTCTACAATGCATGAAGACATATGCAACTTGGCAGAAGAGAAAAGAGTATCCATCATCATAATTCCTTTCCACAAGCAACAAACAGTTGATGGAGAAATGCAAGAGACTAATCCAGCATTCAGAATGGTGAACCATAATCTAGTACAGAATTCTCCTTGTTCAGTTGGGATACTTGTTGATAGAGGCCTAAACGGATTGAACCGATTAACCGGGAGCCTCGCATCACACGAGGTAACTGTGTTATACTTTGGAGGACCAGATGATAGGGAGGCACTATCCTATGGATGGAGAATGTCAAGGCATCCAAGGGTTCATCTCACAGTGATGCATTTTATTCCAGGGATTGATGCAAAAACAGTGACACTAGCAAAAGAAGTAGATGATGAAAGAGAAATGGGTATAAATTATAGGAATGGGAGTGTGAAAGAGAATAGAATAAATGAGGAGTATATAAATGAGTTCAAGATAATGTCTGAAAATGATGAGTCAGTTGAATACATAGAGAAGGTTGTGAATAATGGAGAGGAGACAGTATCAGCAATAAGATCAATGAACAATGTGAATGATTTGTTTATAGTTGGTAGAGGTCAAGGTTCAACATCATCAGCAACACTAACAGAAGGACTAACAGATTGGAGTGAGTGTCCAGAACTTGGTGCAATTGGAGATTTGTTGGCTTCATCAGATTTTGAAACATCAGCATCAGTGTTGGTGATGCATCAATATATAGGGGAAGGGCCAGAAGGGGAAGAGGTTTATGTATCTGATAAACCATGGCATTCAAATGAAAACCATCCTTCTGTAAGACATATGTCAATGGCAACAAGATATGCACCAATGCCAATGCCAATGGCCAATCATCTTTTTTAA 2541 0.3947 MDNSSIIASSGNVTDKSLICYTPAMTTTNGLWEGDNPLEYSLPLFILQLTLVVLSTRFFVFILKPFNQPRVIGEIMGGLLLGPSVLGRNEEFASKVFPLKSVMVIETMASMGLIYFLFLVGLEMDISVVKRTGKKAVSIAIAGMILPFILGIFFSFFLDEHHLHMSRASLVLYIGVALSVTAFPVLARILAELKIINTELGKLALSTALINDMCAWILLALAIALSEKNSVNTWASVWVVLTSGVFATFCFVVVRPGISWMIRKTPEGQPFSEFQICFVLTGVMISAFITDVIGTHSVFGAFIYGLVIPNGPLGATIIEKLEDFVSGLLLPLFFALSGLKTDISLVKGANRWFGALMVVPLACIGKIIGTLLISMLFQIPTREGVILGLLMNTKGLVEMIVLNVGREQKVLGDEIFSIMVVVTLVMTALISPIVTLIYKPRKRLIPYKKRTMQNSRLDAELRVLVCVHVPRNVPTIINLLEATHPSKKSPICAYVLHLVELTGRASAMLIVHASRKSDRPALNKTQAQTDHIINAFQNFEEQIGYVSVQPLTAVSPYSTMHEDICNLAEEKRVSIIIIPFHKQQTVDGEMQETNPAFRMVNHNLVQNSPCSVGILVDRGLNGLNRLTGSLASHEVTVLYFGGPDDREALSYGWRMSRHPRVHLTVMHFIPGIDAKTVTLAKEVDDEREMGINYRNGSVKENRINEEYINEFKIMSENDESVEYIEKVVNNGEETVSAIRSMNNVNDLFIVGRGQGSTSSATLTEGLTDWSECPELGAIGDLLASSDFETSASVLVMHQYIGEGPEGEEVYVSDKPWHSNENHPSVRHMSMATRYAPMPMPMANHLF 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1770 846 PANTHER CATION/H+ EXCHANGER 3 13 834 - -
Lal5g1770 846 Pfam Sodium/hydrogen exchanger family 51 434 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lal5g1770 846 Gene3D - 44 444 IPR038770 -
Lal5g1770 846 PANTHER CATION/H + ANTIPORTER 13 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1770 Lal-Chr5 19701838 19705209 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1770 14 821 Antiporter Super Family AT2G13620 64.444 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1770 - - gmx:100800514 1238.02