Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1765 ATGACCAACTTCACTATTCTCAACCGTTTCTCTACGGCTTTTCGTGACTATAACTCTCATCTCAAACTTGTATTGATATGCACCACTGTAAGTGGTGGTGGTGTTTTGGGATACAACGCGGTGGTTGGTTCATCGGAAGATGCCGTAGTGGCGGCTACAGATAAGAAAAAGGTGGTGGTGCTTGGAACAGGATGGGCGGCTACAAATTTCATGAAGAATCTAAACAATCCAAAATATGATGTACAAGTGGTATCTCCTCGTAATTACTTTGCATTCACTCCTTTGCTTCCTAGTGTTACTTGTGGCACTGTTGAAGCTCGCAGCATTGTTGAACCAGTTCGCAATATTTTTCCTAAGAAAAATGTGCAAGTTCAATTCAGTGAAGCTGAATGTATCAAGATTGATGCTGAAAACAAGAAAGTTTACTGTCGATCGATTTCAAAGAATAATTTGAATGGGAAGGAAGAATTTGCTGTGGATTATGACATCCTAATCATATCAGTTGGAGCTAATGTCAACACATTTAATACACCAGGAGTGGTAGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCAGAGAAGATTAGAAGAACAGTTATTGACTGCTTTGAGAGGGCAAGTTTGCCTGATATAAGTGAAGAAGAGAGGAAGAGAATTCTTCACTTTGCTATTGTTGGAGGTGGTCCAACTGGAGTGGAGTTTGCAGCAGCACTTCATGATTTTGTCAATGGAGATTTGGTCAAATTATACCCTGGGATTAAAGATTTAGTTAAAATTACACTTCTAGAGGCAGGAAATCATATCTTGAGCATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGACAAGTTCCAAAGAGAAGGGATTGATGTGAAAACAGGATCCATGGTTGTGAAAGTAACTGATAAAGAAATTTGCACTAAAGAACTGAAGAATGGAGGTCAAATCACTTCTATTCCATATGGAATGGCTGTATGGTCAACTGGCATTGGCACTCGTCCATTCATTAAAGATTTCATGGCACAAATTGGTCAGTATTCACTCAGCATTGTCTCTTCTCAACAGGGTAATAAGCGTGCTCTACTTACTGATGAATGGTTGAGAGTTGAGGGATTCAATGATGTGTATGCACTTGGTGATTGTGCCACTATAAACCAGCGAAAAGTCATGGAAGACATTGCAGCCATATTTAAGAAGGCTGACAAAAATAATTCTGGAACACTAACGGTCAAAGAATTTCAAGAGGTGATGAATGACATCTGTGAAAGATACCCTCAGGTGGAGCTATATCTGAAGAACAAACAGATGAGTAACATTGCTGATTTATTGAATGAAGACAATATTGATGTTAAAAAACAACTCAATATTGAAGAACTAAAAACAGCACTTTCCAAAGTGGATTCTCAGATGAAATTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACTTATCTGGCCAAGTGTTTTAACCGAATGGAAGATTGTGAAGAGAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGCCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTTGCTCCTTTGGGAGGAGAGAAGACAGCAGCACAGCTTCCTGGTGATTGGGTTTCAATTGGCCACAGCAGTCAATGGCTTTGGTATTCTGTCTATGCAAGCAAGCAAGTTAGTTGGCGCACAAGGGCGCTAGTCGTTACAGACTGGACAAGACGTTTCGTTTTCGGGAGGGACTCAAGTCGAATCTGA 1767 0.4058 MTNFTILNRFSTAFRDYNSHLKLVLICTTVSGGGVLGYNAVVGSSEDAVVAATDKKKVVVLGTGWAATNFMKNLNNPKYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFPKKNVQVQFSEAECIKIDAENKKVYCRSISKNNLNGKEEFAVDYDILIISVGANVNTFNTPGVVENCHFLKEVEDAEKIRRTVIDCFERASLPDISEEERKRILHFAIVGGGPTGVEFAAALHDFVNGDLVKLYPGIKDLVKITLLEAGNHILSMFDKRITAFAEDKFQREGIDVKTGSMVVKVTDKEICTKELKNGGQITSIPYGMAVWSTGIGTRPFIKDFMAQIGQYSLSIVSSQQGNKRALLTDEWLRVEGFNDVYALGDCATINQRKVMEDIAAIFKKADKNNSGTLTVKEFQEVMNDICERYPQVELYLKNKQMSNIADLLNEDNIDVKKQLNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEDCEENPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEKTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVTDWTRRFVFGRDSSRI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1765 588 SUPERFAMILY EF-hand 383 475 IPR011992 -
Lal5g1765 588 ProSitePatterns EF-hand calcium-binding domain. 402 414 IPR018247 -
Lal5g1765 588 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Lal5g1765 588 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 179 - -
Lal5g1765 588 PRINTS FAD-dependent pyridine nucleotide reductase signature 222 240 - -
Lal5g1765 588 SUPERFAMILY FAD/NAD(P)-binding domain 222 386 IPR036188 -
Lal5g1765 588 SMART efh_1 393 421 IPR002048 GO:0005509
Lal5g1765 588 Pfam EF hand 394 420 IPR002048 GO:0005509
Lal5g1765 588 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 392 IPR023753 GO:0016491
Lal5g1765 588 PANTHER NAD(P)H DEHYDROGENASE B2 4 588 - -
Lal5g1765 588 PANTHER NADH DEHYDROGENASE 4 588 IPR045024 GO:0003954|GO:0006116
Lal5g1765 588 SUPERFAMILY FAD/NAD(P)-binding domain 55 274 IPR036188 -
Lal5g1765 588 Gene3D - 436 587 - -
Lal5g1765 588 Gene3D - 49 435 - -
Lal5g1765 588 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1765 Lal-Chr5 19675550 19679481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1765 1 588 Chloroplast and Mitochondria Gene Families AT4G21490 70.489 0.0 844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0976 23 11749477 11756268 Lal5g1765 5 19675550 19679481 PCT
Lal5g1765 5 19675550 19679481 Lal23g0976 23 11749477 11756268 PCT