Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1758 ATGGGTTTTAAGAATTTGGAGTTGCATGTCCGAGTCTTTGTTTTCTACATACTGATTCTCACTACAACTTTCTGTGTTGGGGACACTGACATTGTTGATGTTGCAACAATCAATAGTTTATATGTTTCTCTTGGCTCACCACCTCTTCAAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTTGAACTGTGGGAAGGTGTGGCTTGTGTCTTCTCCAACATAACTGCCATACACCTCGGAAGCATGAATTTGAGTGGAGAGCTAGGCAGTAATTTGGATTTCCCATCCATCTTAGAAATCGACCTTAGCAACAACCATATTGGTGGGCCCATTCCATTTACTTTGCCACCTACTCTGAGGATCTTGTCTCTATCAGGAAATCAGTTAAATGGAAGCATTCCAGATGGTTTTTCCTTATTAACTGAATTGTCAAACCTGGATTTGTCAAGCAACAACTTGAGTGGTCAGCTGCCTTCCTCAACGGGGAGTTTATCATCTCTTACCACATTACACTTGCAGAACAATCAACTTTCTGGAACTCTTGATGTTTTGCAGGACCTGCCTCTTCAGGATCTGAATATAGAGAATAATTTATTCTCTGGGCCAATTCCTCCAAAATTGTTGTCTATCCCAAATTTCAGAAAAGATGGGAATCCTTTTAATACTACTATAATTCCGTCTCCTCCGGCTCCTGCACCAACCCCTTCACCAATCCCTTCACCAGCTCCTTCACCGTTATCTGTGGCTCCATCCCCAGGAGAATCGCCTTGGAAAGTGGCAACTAGTCCATCTACCATAGCACCAACGCAAGCAAGTGCTAGGAAGTCTTCCATACCAAAGAGTATCATTTGGATTGCTGGTGCAGGTTTTTTAATATTGGTTGCATTAGGAGCTTCACTTTTTATGCTGTGGAGCTTTAAGAGGTCAGAGAAGAAAAATGACAAGAAACATGATGCAGTTTACGAAGCAACTAATCAAGTGGAGAAAGGTGAGAAACCATCACTTCTATATGAAGTAGCAAATAAAAGAATGAGTTTGATTCCAAAGGTTCAAGGTGAACAAGAAATATCTGTGAAAATAGTATCTGCAACTTCTGAAAGTGATGATGATGGGATTGGTGGCAGTTCTAAACTTCCACCTCTGCAGCCACCTCCACATCCTCTCCCAACTATTCCTGCCGAGGTCATCTTTAATCCGGCTATACCTGCCAAAGCAACTGAAAGACATGGTTCCATAACGGCTTATACTGTCGCATTGCTTCAGCAGTATACAAATAGCTTTTCCCAAGAAAACTATATTGGGGAAGGCACACTCGGACCTGTTTATAGGGCTGAACTCCCTGATGGAAAGCTGTTGGCAGTGAGGAAACTGGATGCTACTGCTTCCACGGGGCAGGATTATGAACAATTTCTTCAATTAGTATCTAGCATCTCAAAAATTCAGCACTCTAATATTGTAAAGTTCATGGGTTACTGTGCTGAGTATAACCAACGATTACTTGTATATGAGTATTGCAATAATAGGACTCTATATGATGCACTGCACGGGGAGGATGAACACCATATAGAACTTCCATGGAATGCACGCATTTGTGTGGCACTTGGAGCAGCTAGAGCGTTAGAGTACCTTCATGAGAACTTCCGGCCACCTATCGTCCATCGAAATTTTAGGTCTGCTAATGTTCTCCTGAATGACAAGCTGGAAGTCTGTGTCTCGGATTGTGGATTAGGTCCTTTGCTATCTTCTGGCTCTGCTGGTCAGTTGTCAGGACGTCTCCTCACAGCTTACGGTTACAATGCACCAGAAGTTGTGTCCGGAAGTTATACACAACAAAGTGATGTTTTCAGTTTTGGAGTTGTGATGCTAGAACTTATCACTGGACGAAAATCCTACGATAGGTCACTACCTCTTAGAGAGCAATTTTTGGTTAGATGGGCAGTCCCTCAACTACATGACATTGATGCATTGTCAAAAATGGTTGACCCCAACTTAAATGGTGCCTATCCTATCAAGTCTTTGTCACGTTTTGCAGATATTGTTTCCTCGTGCGTACAGCATGAACCTGAATTTCGGCCAGAAATGTCCGAAATTGTTCAAGATCTGTTGCGAATGATGTAG 2118 0.4263 MGFKNLELHVRVFVFYILILTTTFCVGDTDIVDVATINSLYVSLGSPPLQGWKPVGGDPCFELWEGVACVFSNITAIHLGSMNLSGELGSNLDFPSILEIDLSNNHIGGPIPFTLPPTLRILSLSGNQLNGSIPDGFSLLTELSNLDLSSNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLDVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFRKDGNPFNTTIIPSPPAPAPTPSPIPSPAPSPLSVAPSPGESPWKVATSPSTIAPTQASARKSSIPKSIIWIAGAGFLILVALGASLFMLWSFKRSEKKNDKKHDAVYEATNQVEKGEKPSLLYEVANKRMSLIPKVQGEQEISVKIVSATSESDDDGIGGSSKLPPLQPPPHPLPTIPAEVIFNPAIPAKATERHGSITAYTVALLQQYTNSFSQENYIGEGTLGPVYRAELPDGKLLAVRKLDATASTGQDYEQFLQLVSSISKIQHSNIVKFMGYCAEYNQRLLVYEYCNNRTLYDALHGEDEHHIELPWNARICVALGAARALEYLHENFRPPIVHRNFRSANVLLNDKLEVCVSDCGLGPLLSSGSAGQLSGRLLTAYGYNAPEVVSGSYTQQSDVFSFGVVMLELITGRKSYDRSLPLREQFLVRWAVPQLHDIDALSKMVDPNLNGAYPIKSLSRFADIVSSCVQHEPEFRPEMSEIVQDLLRMM 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1758 705 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Lal5g1758 705 ProSiteProfiles Leucine-rich repeat profile. 166 188 IPR001611 GO:0005515
Lal5g1758 705 MobiDBLite consensus disorder prediction 220 271 - -
Lal5g1758 705 PANTHER LEUCINE RICH REPEAT KINASE 2 405 705 - -
Lal5g1758 705 PANTHER LEUCINE RICH REPEAT KINASE 2 9 146 - -
Lal5g1758 705 PANTHER LEUCINE RICH REPEAT KINASE 2 135 324 - -
Lal5g1758 705 SUPERFAMILY Protein kinase-like (PK-like) 410 701 IPR011009 -
Lal5g1758 705 Gene3D Ribonuclease Inhibitor 35 228 IPR032675 -
Lal5g1758 705 MobiDBLite consensus disorder prediction 364 385 - -
Lal5g1758 705 Gene3D Phosphorylase Kinase; domain 1 400 504 - -
Lal5g1758 705 Pfam Protein tyrosine and serine/threonine kinase 430 701 IPR001245 GO:0004672|GO:0006468
Lal5g1758 705 ProSiteProfiles Protein kinase domain profile. 427 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1758 705 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 146 - -
Lal5g1758 705 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 405 705 - -
Lal5g1758 705 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 135 324 - -
Lal5g1758 705 Gene3D Transferase(Phosphotransferase) domain 1 506 705 - -
Lal5g1758 705 MobiDBLite consensus disorder prediction 224 250 - -
Lal5g1758 705 SUPERFAMILY L domain-like 40 212 - -
Lal5g1758 705 MobiDBLite consensus disorder prediction 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1758 Lal-Chr5 19569316 19575424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1758 33 705 Strubbelig Receptor Gene Family AT4G03390 51.691 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal5g1758 PK_Tyr_Ser-Thr 2.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1758 - - ahf:112783685 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1758 5 19569316 19575424 Lal11g0158 11 1041763 1048033 LSH