Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1752 ATGTTCGCAGTAAGGGCAACGTTTGGTGAGGAAGAGTGGTATTTTTTCAGCCCAAGGGATAGGAAATATCCAAATGGATCAAGGCCTAACAGGGCTGCAACTTCTGGATATTGGAAAGCTACTAGAACAGACAAGCCTATATTAGCTTCTGGTGGGAACCACAAAGTTGGAGTGAAGAAAGTGCTTGTTTTCTATGGTGGTAATCCTCCAAAAGGGGTTAAAACAAATTGGATTATGCATGAATATAGACTTCCTAACAATCCCTCAAACACTCCTTCTGTCACTGCACCAAGAAGAATTCCCTCAGGGTATGTATCATGCATGCCACATCCATAG 336 0.4256 MFAVRATFGEEEWYFFSPRDRKYPNGSRPNRAATSGYWKATRTDKPILASGGNHKVGVKKVLVFYGGNPPKGVKTNWIMHEYRLPNNPSNTPSVTAPRRIPSGYVSCMPHP 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1752 111 PANTHER NAC TRANSCRIPTION FACTOR 56 5 94 - -
Lal5g1752 111 SUPERFAMILY NAC domain 7 91 IPR036093 GO:0003677|GO:0006355
Lal5g1752 111 Pfam No apical meristem (NAM) protein 6 84 IPR003441 GO:0003677|GO:0006355
Lal5g1752 111 Gene3D NAC domain 2 108 IPR036093 GO:0003677|GO:0006355
Lal5g1752 111 ProSiteProfiles NAC domain profile. 1 111 IPR003441 GO:0003677|GO:0006355
Lal5g1752 111 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1752 Lal-Chr5 19542814 19544293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1752 4 92 NAC Transcription Factor Family AT3G15510 78.889 5.83e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal5g1752 NAM 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1752 - - zju:107423224 167.548