Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1726 ATGGCTTCAAACAGTGATGATCTCTCAGAATGGGACGCTGATAAATTGCTTCGAATATATTTGCATGAGTACATGTTAAAAAGAGGAATGCACCGTAGTGCTGAAATTTTCAAGGAAGAAGGCCAGATTGGTCACAAGGACTCCACTGTGATTGATTCTCCTAAGGGGTTCCTGTATGAATGGTGGTCTATTTTCTATGGTGATGTATATAGCTCTTGGACGGTGAAGGATCAGGAGAATGTTCCAGAACCCTCTTATAAGATGACAGATAATGCAAGGAATGGTAATTCCTTTCCTATGATCCCTCAAATACCAATGAGTCAGCAGAGACCTTTACCTCATCAATTTCAAGCCAGCTCCAGCTTTAACTCCATGCCGGCACAACTAGCTGCTGGTCTAATACCTTCAACACCGTACCATAAAGAACATCTTGAACATCTGGTGGGAAATGGCGAGCCAAGTTTGCAGGATACTTTCAAAGCAATTAACCTAAAGTTCTCAGCTGAGAGTAGTTCAAATCATTCCCTGCTAGATGTAGGCAAGCAGACCCAGAACCAAATCTTTAAGGATAGTGGAATTGGCATCCGTTTGGTGAAAGATGTATCTAGAGACCCTCTGCAATTACTACAACCAAACATGCTCCAAAACGGTAGACCTCTTTCCACTTTGATTCGGAATATTCAGCGACTCACTCCATCAGCGACGTGCAAGGGATTGACATGCTTTGTTGCATTATCCTCTTCCTTTGTATTTTTCTCTGTTCCTCTGATGATATCTAAATGGTTAGTTTCCTTTGCAGAAACCAGTGAAGCTGTCAATCTAGCGCCACTAAATCGATGGCCAAGAAATAACCAGGTATTAACTTCACTTGTGCACGAACCAAATTATAGCCATCAGTGTCAAGTGTTGAAAACACAAAATCCGAGATCAGTTCCTGCTCAAACACTTGAGTCTGCTCCTGCAAGCCAGACTTTTACTGTTCCTGCATACTCTACCAAATACAGCAGTCAATATCTGAATACTCCAAGTCCAAAGACTGAATCGAATAATAAGGATAAGCAGAAGATGGACCAAGTGATTAAAACTGGGGAAAATCAAAACCAGCAGGAGCAGACGCAGTTCCTTAATGTTGAGAAGAGTGGAAAAAGAAGGAAAACAGTATCCTTACGACCTGGACAAAGTGCCCAGGACTGTGCGGGTGCAGCAGATGGGAAACCTGTTGATGAAAATGTGGAGTCCTTCCTCTCTTTGGAAAATGAACATGCTGATCATAGAGTTCTGCCTTTCAGCAATCTGAAACGTATTTCAACTTCATACAGTAGAAATGAAAATAAAGAGGTTGGTTGCCTTCATTCAAGCAAAAGCAAGGTTTTGTCCAGCCATTTTTCATCGGATGGAAAGATTTTGGCAAGTGCTGGACATGAGAAAAAGGTTTTCATTTGGAACATGGAAACTTTTGATTGTGCCACTACTGCAGAAGCACATTCACTTCTCATCACAGATGTTCGGTTCAGAACTGGTTCGACTATCTTTGCAACGTCCTCCTTTGATAGATCTGTAAGACTTTGGGATGCAGCCAGACCTACCAGATCTTTGCTCAAACTTGATGGGCATGCTGAACAAGTAATGTCATTGGATTTCCACCCAAGAAAGGTGGACCTTCTATGCTCATCGGATAGCGATGATGTAATTCGGCTGTGGAATGTCAAAAAAGGTGCATGCATGCATGTCACTAAGGGAGGTAGTAAACAAGTCAGATTTCAGCCTGATCTTGGGAAGCTTCTTGCTACTGCTACAGGAAATGATATCAAGATAGTTGATGTTGAGGCTGATAGAATTCTGTGCAATCTAAATGGACATGTTAAAGATGTTATCTCCATTTGTTGGGATGGAAGTGGAAAATATATTGCCTCCGTAAGTGAAGATAGTGCGCGTATCTGGTCATCAGATGGAAAATGCATCCATGAATTACAATCAACTGGAAACAAGTTCCAATCGTGCATATTTCATCCAGCCTATCAAAACCTCTTAGTTATTGGTGGCTATCAGTTTCTGGAATTATGGAGTCCCACAGAGGGCAATAAAACTTGGGCTGTTGCAGCACACAAGGGATTAATTGCTGGATTAGCAGAATCACCCCATGGTGAACTGATTGCCTCAGCTAGCCATGATTGTTGTGTGAAATTATGGAAATAA 2196 0.418 MASNSDDLSEWDADKLLRIYLHEYMLKRGMHRSAEIFKEEGQIGHKDSTVIDSPKGFLYEWWSIFYGDVYSSWTVKDQENVPEPSYKMTDNARNGNSFPMIPQIPMSQQRPLPHQFQASSSFNSMPAQLAAGLIPSTPYHKEHLEHLVGNGEPSLQDTFKAINLKFSAESSSNHSLLDVGKQTQNQIFKDSGIGIRLVKDVSRDPLQLLQPNMLQNGRPLSTLIRNIQRLTPSATCKGLTCFVALSSSFVFFSVPLMISKWLVSFAETSEAVNLAPLNRWPRNNQVLTSLVHEPNYSHQCQVLKTQNPRSVPAQTLESAPASQTFTVPAYSTKYSSQYLNTPSPKTESNNKDKQKMDQVIKTGENQNQQEQTQFLNVEKSGKRRKTVSLRPGQSAQDCAGAADGKPVDENVESFLSLENEHADHRVLPFSNLKRISTSYSRNENKEVGCLHSSKSKVLSSHFSSDGKILASAGHEKKVFIWNMETFDCATTAEAHSLLITDVRFRTGSTIFATSSFDRSVRLWDAARPTRSLLKLDGHAEQVMSLDFHPRKVDLLCSSDSDDVIRLWNVKKGACMHVTKGGSKQVRFQPDLGKLLATATGNDIKIVDVEADRILCNLNGHVKDVISICWDGSGKYIASVSEDSARIWSSDGKCIHELQSTGNKFQSCIFHPAYQNLLVIGGYQFLELWSPTEGNKTWAVAAHKGLIAGLAESPHGELIASASHDCCVKLWK 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1726 731 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 492 524 - -
Lal5g1726 731 ProSiteProfiles Trp-Asp (WD) repeats profile. 450 491 IPR001680 GO:0005515
Lal5g1726 731 SUPERFAMILY WD40 repeat-like 445 731 IPR036322 GO:0005515
Lal5g1726 731 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 699 731 - -
Lal5g1726 731 Gene3D - 346 582 IPR015943 GO:0005515
Lal5g1726 731 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 535 572 - -
Lal5g1726 731 MobiDBLite consensus disorder prediction 363 404 - -
Lal5g1726 731 ProSitePatterns Trp-Asp (WD) repeats signature. 555 569 IPR019775 -
Lal5g1726 731 CDD WD40 446 731 - -
Lal5g1726 731 ProSiteProfiles Trp-Asp (WD) repeats profile. 492 524 IPR001680 GO:0005515
Lal5g1726 731 Gene3D - 583 731 IPR015943 GO:0005515
Lal5g1726 731 MobiDBLite consensus disorder prediction 336 355 - -
Lal5g1726 731 ProSiteProfiles Trp-Asp (WD) repeats profile. 535 577 IPR001680 GO:0005515
Lal5g1726 731 Pfam WD domain, G-beta repeat 532 568 IPR001680 GO:0005515
Lal5g1726 731 Pfam WD domain, G-beta repeat 489 524 IPR001680 GO:0005515
Lal5g1726 731 Pfam WD domain, G-beta repeat 699 731 IPR001680 GO:0005515
Lal5g1726 731 Pfam WD domain, G-beta repeat 615 648 IPR001680 GO:0005515
Lal5g1726 731 SMART WD40_4 650 689 IPR001680 GO:0005515
Lal5g1726 731 SMART WD40_4 610 648 IPR001680 GO:0005515
Lal5g1726 731 SMART WD40_4 692 731 IPR001680 GO:0005515
Lal5g1726 731 SMART WD40_4 485 524 IPR001680 GO:0005515
Lal5g1726 731 SMART WD40_4 571 607 IPR001680 GO:0005515
Lal5g1726 731 SMART WD40_4 443 482 IPR001680 GO:0005515
Lal5g1726 731 SMART WD40_4 528 568 IPR001680 GO:0005515
Lal5g1726 731 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 11 731 IPR044716 GO:0003714
Lal5g1726 731 ProSiteProfiles Trp-Asp (WD) repeats profile. 699 731 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1726 Lal-Chr5 19366679 19373877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1726 467 730 Miscellaneous Gene Families AT5G08390 22.662 2.98e-15 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Lal5g1726 WD40 0.0049 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1726 - - gsj:114387334 803.127