Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1723 ATGGAAGGAAACTGGGCTGAGGGAAAGAGGATCTTGGAGTATGATGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGTGATAAGTGAGATAATGAGTAATGGAGAGGAAGGAAGGAATAAGAAAAGGGCAGTAACTACAGATCTTTATAGCAGCAAAAGAGGGTCCAAAGCAAGAGGATCAGTGCCACCTTCCTGTCAAGTAGATAGTTGCAAAACTGATCTAAGTGATGCTAAGCAGTATCATAGGAGACACAAGGTCTGTGAGTACCATGCCAAAGCTCCTTTTGTTCTCATAGCAGATCACCAACAAAGGTTTTGCCAGCAATGTTCCATGAGGTGTCAGAATTTGATGAGTCAAAAAGAAGTTGTAGAAGGCGTTTGGCTGGACATAATGAGAGGCGTCGCAAAAATGCAGCTGATTATCACGGAGAATGATTTCATTGCTGAGACGCAACAAAAATGA 462 0.4221 MEGNWAEGKRILEYDEEEEEEEEEEVISEIMSNGEEGRNKKRAVTTDLYSSKRGSKARGSVPPSCQVDSCKTDLSDAKQYHRRHKVCEYHAKAPFVLIADHQQRFCQQCSMRCQNLMSQKEVVEGVWLDIMRGVAKMQLIITENDFIAETQQK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1723 153 MobiDBLite consensus disorder prediction 1 62 - -
Lal5g1723 153 ProSiteProfiles Zinc finger SBP-type profile. 62 140 IPR004333 GO:0003677
Lal5g1723 153 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 19 110 IPR044817 GO:0003677
Lal5g1723 153 Gene3D - 55 138 IPR036893 GO:0003677|GO:0005634
Lal5g1723 153 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3 19 110 - -
Lal5g1723 153 Pfam SBP domain 65 110 IPR004333 GO:0003677
Lal5g1723 153 SUPERFAMILY SBT domain 63 111 IPR036893 GO:0003677|GO:0005634
Lal5g1723 153 MobiDBLite consensus disorder prediction 13 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1723 Lal-Chr5 19348663 19351775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1723 44 110 SBP-box Gene Family AT1G53160 55.224 2.59e-19 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal5g1723 SBP 7.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1723 - - lang:109329071 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1723 5 19348663 19351775 Lal11g0198 11 1407145 1409370 LSH