Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1694 ATGTGTGGGGGTGCTATCATCTCTGACTTCATTGGTGTGAAGCGTGGTCGGAACTTGGTTACACAAGACCTCTGGGCTGAGCTTGATCCTCTCTCCGATTTTCTTGGCTTTGATGCCAACACCCTTACTTCCAATGACCAACAACCACCAACCCTCTACTTTGATCATAAGCCACCTCAAATCCCACAAACCAAAGGATCTGAAAAGGAAAAGAAGAAAAATTTGAAGTGCTCTCATGAAGAAGCTCCTAAGGCAATGGCTAAGGGTAAGGTTAGGAAGAACGTGTATAGAGGAATAAGGCAAAGGTCATGGGGCAAATGGGCAGCTGAGATTAGGGATCCATATAAGGGTGTCCGTGTCTGGCTTGGCACCTTCAACACCGCCGAGGAAGCCGCTGCCGCCTACGACAAAGCCGCCATCCGCATCCGTGGTGACAAGGCCAAGCTCAACTTCCCTTCACCACCTCCAGCTAAGAAATGCTGCCTCAACCATGATACTAATGTAGCTGAGGATTTTGACCTGAAGCAACAAATCTCAGACCTTGAATGGTTCCTTGAGTTGGAGAATGAACAACCTATGCAGCAGCTGAATAGTGCTGATTGGGACTTTAACAACAATAACAGCAACAACATGGATCTTTGGATGCTGGAAGATGTTGTTATGCCCAACCCTCACTTTGTTTACTAG 687 0.4716 MCGGAIISDFIGVKRGRNLVTQDLWAELDPLSDFLGFDANTLTSNDQQPPTLYFDHKPPQIPQTKGSEKEKKKNLKCSHEEAPKAMAKGKVRKNVYRGIRQRSWGKWAAEIRDPYKGVRVWLGTFNTAEEAAAAYDKAAIRIRGDKAKLNFPSPPPAKKCCLNHDTNVAEDFDLKQQISDLEWFLELENEQPMQQLNSADWDFNNNNSNNMDLWMLEDVVMPNPHFVY 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1694 228 MobiDBLite consensus disorder prediction 62 78 - -
Lal5g1694 228 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Lal5g1694 228 PANTHER EREBP TRANSCRIPTION FACTOR 1 178 - -
Lal5g1694 228 SUPERFAMILY DNA-binding domain 95 152 IPR016177 GO:0003677
Lal5g1694 228 PANTHER DNA-BINDING DOMAIN 1 178 IPR044808 GO:0003700|GO:0009873
Lal5g1694 228 MobiDBLite consensus disorder prediction 47 78 - -
Lal5g1694 228 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Lal5g1694 228 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Lal5g1694 228 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Lal5g1694 228 CDD AP2 96 152 IPR001471 GO:0003700|GO:0006355
Lal5g1694 228 Pfam AP2 domain 95 144 IPR001471 GO:0003700|GO:0006355
Lal5g1694 228 Gene3D AP2/ERF domain 95 153 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1694 Lal-Chr5 19142459 19144531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1694 1 220 AP2-EREBP Transcription Factor Family AT3G16770 40.727 2.48e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal5g1694 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1694 K09286 - gmx:100817253 226.868