Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1678 ATGGGAGTTGAAAAAGAAGGGACAAAAAATGGAGGAGGATATGTTGGAGGTTTTTTCCAGTTGTTTGACTGGACCTCGAAATCCCAAAAGAAGTTATTTGCAGCCAAGTCTGAGTTATCAGAGCCCTCTAAACATCGAAGAAAAGCACATTCCAAATTGGCAACGACACAACCCTATCTGGCGGATGACGATGAGAATGGAGTAGCAGCAAGTGTTCGAAGTTGTGATCGTAGCTATGCTTCATCTATAACGGATGATGAATCATGTGTAACAAGGGCCCCCAGTGTAGTTGCCAGGCTAATGGGATTAGATTCCTTGCCTCCTTCACATTTTTCTGATCCATATTTTGATACACGATCCCTTCAAGACACTCAGTACTTTAGCAAAAGCCTCAACCATCAGCATGACCATCAGACCCTATATTCTGGAAAGCTGGTTGAAAAGGCCGAGGGCTCTTCTAGGAACTTCATGGAGCCAAAGCCTCAAAAGACCCTTACCAGGCCTATTGAAAAATTCCAAACAGAAGTATTGCCTCCAAAATCAGCCAAGTCAATTCCTGTTACTCATCATAAACTTTTGTCCCCTATGAAGTGTCCTGGATTTGTTCCATCCAATAATGCTGCGTATATAATGGAGGCTGCTGCAAGAATTATTGAACCTGGACCTCAAGCTACTACAAAGGCTAAAACAACACCTTTTGTAGCATCTTCAACAGTATCATTGAGGGTTAAAGATTTTAGGGATAAGGTGGAAGCATCACAAAAAGGACCTCTAATTGGGTCTTCTTCAAAGACATCTAGAGCTCGAGATCTAAGAGAAAAAAGAGAAATTTCTCATCGAACAACCAGGAATTCAGAACCTTCTCAAAGACCAGTTGAGTTGCATGATGCCAATTATCCAAAGGGACAGTCTTTTTACAAAAGCTGGAATGGTTCCGTAGGCACATCCATCAAATCATCTACACATGCAGAAGAAGATTCTTCTTTGAAGAGTAAGGGGAAGTCTATTTCACTTGCAGTCCAAGCAAAAGTGAATGTTCAAAGAAGAGAAGGTATGAGTTTGAGTGGTGGCAGAAGTTTGGTGGGCCAGAAAGAGCATCTCGAACCAAACCAGACATCGAAGGCAAATGTTCAGAAAAAATTGCATAAGAAATCTTCTGGTGTTCTGAGGCAGAATAATCTAAAACAGAATAGTTCAGTTGAAAAAGACAAACTACGGACAAAGCCATTGGTTTCTAATTCACACAGTAAAAAAGTTATGACTGCAGATTCCCCTTATGCACGCCATAGAAGCTCTAATAGTAAATCCAATGCAAAATCTAAAGTTGCAACTAGAAAGTCAATCGTGGAGGTCAGTGATAGTGAAAAGGAAGTTTTATATACCAGTACTAACAATTTTCCGAGAAAGAAAATGACTACAGACAGGGACTGGAATGATAGGATTGTCGAAAATTTGTTCGTTGATAAAATGCCGAAGTCTGTTCAGTCTAGCCTAGTCAGTAATAAACAATATAGTTGGGCTGAAGAAACCAAATATAAAGACACAGATGTAGTTTCCTTCACATTTACAACACCATTGACACCGAAGAATCCTGGTTTTGAGACTTCTGGACAAGCTATCCAGAAGACTAATGGTCTTTCCTTGGATCAAAGAATTAAAGTGTTGCTTGACACAGACAATACAAGGTCTCCTATAGGATATAATGTGATTGGTGGTGATGCATTGGGTATGCTTTTGGAACAAAAGTTGAGGGAATTAACTAATGCAGTTGAGAGCTCTTGTCATGGTGATTCTAGTGTGAGGCAACCTTCCAGTGCTGCACCAAAATCAAATGATCTAGATACCCAACTTAATTTAGGTAATACAAGGTTGCAACAGAAGAGAGGTCAAGATATGTTGGTTACAGACAATTTAAGCAGTGGCCAGGATCCTAGCATCTCTTTCACTGGTCTTCCTGAATTTTCATCGAAACATAAATCATGGGTTGATGAGATGGATCCACAGTTATTCAATGGCCTACAACCGAGTCCGATATCTGTTCTCGAGCCTTCTATTTCAATTGAAAGCTGTGAATCTTCATTGAGCACAGGTGTTACTAGTACAGAAGGAAGCAAGTTGTGCTCTTCTATTCAAGCTCAGGAAGTTCATGGCTTGAAATTCTCAAGGAAGTTTTATCCGACTGAATCTGATGCAGAATTATCAGATTCAGCTTCTTCAACATCAACCAGGACCATGATGATAATGAAGCACACAAGTACATTTCCTCTCATTAAGTTTGGAAGATCAAGTACATTGGAGTTGGACTATGTGAAAGACATATTGTCTAATGTTGAATTGATGTATATGGAGTTTTCACTAGGCCAAGCTCGCGAGGTTACAAATCCTTATCTGTTCAACCAGATAGAAAGTCGAAAGGGAGAGCTCGAGTTTGATGGTGTGTCTAAGATGAGAAGGAAAGTTATATTTGATTGTGTGAGTGAATATTTGGATTTAAGATGCAGGTCCTATGTAAGAGGAGGATATAAAATGTGGGCTAAAGGGGTTGCAATGATGAAAAGAAAAGAATGGTTGGCAGAAGAAGTGTACAAGGAGATTTCATGTTGGGATTCAATGGGGGATTCAATGGTGGATGAGCTTGTTGATAAGGACATGAGCAACATATATGGTAGATGGGTAGATTTTAAGGTTGATGGTTTTGAACTAGGAGCAGAGATTGTAGATCAAATATTTAATTATTTGGTTGATGATGTTATTGCTGATATGTTGCAACTCTAA 2775 0.396 MGVEKEGTKNGGGYVGGFFQLFDWTSKSQKKLFAAKSELSEPSKHRRKAHSKLATTQPYLADDDENGVAASVRSCDRSYASSITDDESCVTRAPSVVARLMGLDSLPPSHFSDPYFDTRSLQDTQYFSKSLNHQHDHQTLYSGKLVEKAEGSSRNFMEPKPQKTLTRPIEKFQTEVLPPKSAKSIPVTHHKLLSPMKCPGFVPSNNAAYIMEAAARIIEPGPQATTKAKTTPFVASSTVSLRVKDFRDKVEASQKGPLIGSSSKTSRARDLREKREISHRTTRNSEPSQRPVELHDANYPKGQSFYKSWNGSVGTSIKSSTHAEEDSSLKSKGKSISLAVQAKVNVQRREGMSLSGGRSLVGQKEHLEPNQTSKANVQKKLHKKSSGVLRQNNLKQNSSVEKDKLRTKPLVSNSHSKKVMTADSPYARHRSSNSKSNAKSKVATRKSIVEVSDSEKEVLYTSTNNFPRKKMTTDRDWNDRIVENLFVDKMPKSVQSSLVSNKQYSWAEETKYKDTDVVSFTFTTPLTPKNPGFETSGQAIQKTNGLSLDQRIKVLLDTDNTRSPIGYNVIGGDALGMLLEQKLRELTNAVESSCHGDSSVRQPSSAAPKSNDLDTQLNLGNTRLQQKRGQDMLVTDNLSSGQDPSISFTGLPEFSSKHKSWVDEMDPQLFNGLQPSPISVLEPSISIESCESSLSTGVTSTEGSKLCSSIQAQEVHGLKFSRKFYPTESDAELSDSASSTSTRTMMIMKHTSTFPLIKFGRSSTLELDYVKDILSNVELMYMEFSLGQAREVTNPYLFNQIESRKGELEFDGVSKMRRKVIFDCVSEYLDLRCRSYVRGGYKMWAKGVAMMKRKEWLAEEVYKEISCWDSMGDSMVDELVDKDMSNIYGRWVDFKVDGFELGAEIVDQIFNYLVDDVIADMLQL 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1678 924 MobiDBLite consensus disorder prediction 349 441 - -
Lal5g1678 924 MobiDBLite consensus disorder prediction 314 334 - -
Lal5g1678 924 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 922 - -
Lal5g1678 924 Pfam DUF761-associated sequence motif 81 112 IPR032795 -
Lal5g1678 924 MobiDBLite consensus disorder prediction 412 441 - -
Lal5g1678 924 MobiDBLite consensus disorder prediction 590 616 - -
Lal5g1678 924 MobiDBLite consensus disorder prediction 36 60 - -
Lal5g1678 924 PANTHER EXPRESSED PROTEIN 1 922 - -
Lal5g1678 924 MobiDBLite consensus disorder prediction 250 299 - -
Lal5g1678 924 MobiDBLite consensus disorder prediction 266 283 - -
Lal5g1678 924 Pfam Domain of unknown function (DUF4378) 766 916 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1678 Lal-Chr5 19015309 19019868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1678 16 922 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 29.203 8.74e-84 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1678 - - gmx:102669513 1242.64