Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1673 ATGGAAGAAGCAAAAAGCCGATGGCTACGCCCCAATGAGATTCATGCCATACTCTGTAATAACAAGTACTTCACGATCCGTGTCAAGCCAGTGCATTTGCCCAAAAGTGGCACTGTTGTATTATTTGACCGCAAGGTGCTTAGGAACTTTCGAAAAGATGGGCACAATTGGAAAAAGAAAAATGACGGAAAAACTGTTAAAGAGGCTCACGAGCACTTAAAAGTTGGTACTGAAGAAAGGATCCATGTATATTATGCCCATGGACAAGATAACCCGAGCTTTGTTCGTAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCATGTAGTCCTTGTTCATTATCGTGAAACACAGGAGGTCGTGTTGCAAGGTTCTCCTGTCACACCTGTATATTCATATTCAAGTTCTTCCTCTGATCCAACTGCACCTTTGATTTTACCGGAAGGCTTAGATTCTGGGACCAACATTGCTTATACTGATGGGCTTAATGACAATTTAACAGTCAAAAGTCATGAAATAAGACTTCATGAGCTTAACACACTTGAATGGGATGACTTAGTGGCTTCAAATGATAACACCTCTACTAAACCTGCTGAAGGCAATGTTCCATGTTTGCATCAACAAAATCAAAGTTTACTCAATGGAAGCTTTGGTCATAGTCCTTGTCACCAGGTAGCAAGCAATCCTTCTGCAGAAGTTCCTTCTTTTGATAATTCAACTCAGCCAATTTCTGGAAGCAATTGTGTTTCGCACAGTTTTCTAGAAATTGGTAATGTTCAAAAGGATTGTCCTATCTCTTTGGTTAGTGTTGATTCCTTAGACACTTTGGTCAATGGAGGCTTGCAAAGTCAGGACAGCTTCGGAAAGTGGATAAACGGCATCATATTGGATTCACCATGTTCTGCAGATGAGTCTGCTCTCAAATCCTCCATTTCTTCATCTGTTCATAAACCAAATTCGTCATATGTGGTGGATAATCAGAATTCTTCTCTGCCAGAGCAAGTATTTAATATCACTGAGGTGTCCCCTGCATGGGCATCTTCCACTGAGAAGACAAAGGTCTTGATAACTGGATTGTTTCATAATGATTATCAGTCCCTTGCAAAGTCCAATCTACTGTGTGTCTGTGGTGATGTAAGTGTTCCTGTAGAAGTTGTTCAGGTTGGAGTTTACCGATGCTGGGTATCACCACATTCTCCTGGATTTGTGAGTCTCTATATGAGCTTGGATGGCCATAAGCCTATTAGCCAAGTTGTCAATTTTGAGTATCGTACTCCTGTTTTGCATGACCCTGCCGCTTATATGGAAGGGAAACACAACCGTGAAGAGTTTCGACTCCAAATGAGACTTGCTCATTTGCTCTTTACTACACAAAGGAGCCTTGATATTTTCTCTAGTAAAGTATCACCTGATGCACTGGAATATGCTAGGAAGTTTGTCTCCAAAACATCATTCATGGCCAACAGTTGGCAATACTTGATGAAATCAACTGACGACAATACAATTCCATTTTCACAAGCAAAAAATGACTTGTTTGAAATTTCATTGAGAAACAGACTAAAGGAATGGCTTTTGGAGCGAATTGTATTAGACTGTAATACTACCGAATATGATGCACAAGGCCAAGGTGTAATCCATTTATGTGCAATTCTGGGTTATACTTGGGCTGTGTCCTTATTTTCATGGTCAGGCCTGACGCTAGATTTCCGCGACAAATATGGATGGACAGCTCTTCATTGGGCAGCATATTATGGAAGGGAGAAGATGGTTGCAACTTTGTTGTCGTCTGGGGCTAAGCCAAACATGGTCACAGATCCAACTCCACAAAATCCGGGTGGATGTACTGCTGCTGATCTTGCGTATGTGAAGGGATATGATGGCTTAGCAGCGTATCTTTCAGAAAAATCTTTGGTTGAACAATTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCGCTGGAAACTAGCACAACTGATCCAGTAAAATCTGAGAACCTTACTGAGGACCAGTTGTACATGAAGGAAACATTGGCAGCTTACCGAATAACTGCTGAGGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCACTCGCTAAAATTGCGATCGCAGGCGATTGAATTTCTCAGTCCAGAGGATGAAGCACGCCATATAGTAGCAGCAATGAAGATTCAGCATGCCTTTCGCAACTTTGAGAGTAGGAAAATGATGGCAGCTGCTGCTCGGATCCAACACAAATTCCGTGCGTGGAAGCTCCGTAGAGAATATCTCCACATGAGACGGCAGGCTATTATAATTCAAGCTGCTTTCAGGGGATTTCAAGTGCGGAGGCAATATCGTAAAATTATTTGGTCTGTTGGAGTGCTCGAGAAAGTAATCTTGCGTTGGCGTCTAAAGAGAAAGGGCTTCCGTGGCCTCCAGGTTAACCCTGTTGAAGAAATTAAAGATGACAAGCAGGAAAGTGATATAGAGGAGGACTTCTTCCGAATTGGTAGGAAACAAGCTGAAGAACGCGTAGAGAGGTCTGTAGTTCGTGTACAGGCCATGTTTCGTTCTAAGAAAGCACAAGAAGAGTATAGGAGGATGAAGCTGGCTCATAGTCAAGCAAAGCGTGTCAAGGTATACCGTCTGAATGATGATGGGAAATGGGATGACCAGGGAACTGGGCACGTTACTGTTGATTATCTGGAGGGTCAATGCATACCGTTGTTGTTAAAGCATAGCGTCAACCTTAGAGCGGGAGACGAGCGTTCAGAAGAGCTGGGTTTATTTGTTTATGATGAAGAAGATAATGAGACCATACTTTTGCATCGCATCACTTCTGATGACATTTATAGGAAACAAGAAGATACAATTATATCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGCTTTCAAGAGCCTAGTGGATGCTCTTACATATGGGATCATATTTGCAATGTGCAAAGGAATATGCAGTTTAATAATTTAAACAGTGAGGCATTTCACAGTGTGAACAGCGAGCTAAGGGACTTGCCTGCAGTTGAGTTGTCAACGCTTCCCTTAATTCTTAAGCCTACCATAACATTTCTGGTTGAAGATATGGAAGTGCTTGTTTCAGTTTATTTACCATATTTCTTTGCTATCAATCCACTCTCCATCCTTGAAGCACTTGCCAGCCACTGTCACATTACTGTGGTCGAGAGTGGCATTGCAGATCAGTTGCGGCTTACGGAACTAGTTTTAAACGATACTTCGGAATTTCTTGTCTTATCTGAATATATAATCAAATTTGTTTATGGTCTTGAAATTGAGAACATTGGACAGCTTTCTCAAGATTTTTTCCGGAAGCTGGTGGAAGTATTTAGAGTTTGTGAAGACTTGGAAAATATGGATGGCCTTCACATGATCTTCAAAATAGTCAAAGGGATCATTTTGCTGAATAGCACACAAATTTTTGAGAGATTATTCAGTGATGAATTCATAATGGACATTATTGGTTCCCTTGAGTATGATCCGGAGGTTCCTCATTTTAAACATCATCGTAAATTCTTAAAAGAGCATGTTATTTTTAAGGAGGCGATACCAATAAAAAATAATCTAGTGCTTTCAAAGATACATCAGACATATAGAGTTGGTTTTTTGAAGGATGTTGTTTTGGCAAGAGTGCTGGATGAGGCTACTGTTGCATGTTTTAATTCCATAATACATGCAAACAATGCGACCGTTGTTTCATTATTGAAGGATGACAATACATTTATCCAGGAGTTGTTTGCTAGGTTGAAAACGCCCACCACCTCTCTCGAATCAAAGAAAAATATGGTCTATTTCTTGCATGAGTTTTGTAATTTAAGCAAGAACTTACCGATGGTCCAGCAGCTTCAGTTTTTTAGGGATCTGACCAATGAAGGCATCTTTGACATTATTACTGATGTTTTGCAAAGTCAAGACAAGAAGCTTGTGCTTACTGGAACAGATGTCCTCATGCTCTTCTTGAATCAGGATCCTAATCTTCTGAGGTCCTATGTCGTTCGGAAGGAAGGTGTTACTCTTCTAGGACTATTGGTTAGAGGAATGATAACAGATTTTGGGGATGACATGCATTGCCAATTTCTTGAGATTCTTCGCAGTTTATTGGACTCATGCGCATTGGCTGGAGCAGGAGCACAGAGGGACACTATTATTGACATTTTCTATGAGAAGCATTTGGGTCAACTGATCGAAGTGATAACATCATCTTGTCCTTCAGAAAATGTTGCTTGTGAAAGCAACAAACCAATAGGTCCTGGACTAGGAGTTCAGTATCAAAGTGAGACAAAGGCAGAGATACTATCAAATATATGTGAATTACTAAGCTTTTGTGTCCTACACCACCCATACAGGATAAAGTGCAACTTCCTTCTTAATAATGTGATTGATAAAATTTTGTTACTGACACGGAGAAGAGAGCAATACCTTCGTGTTGGTGCTGTCCGGTTTGTTCGTACTATTCTCTCGCGCAATGATGAGCATCTAATAAATCATTTTGTTAGAAACAACCTTCTCAAACCAATTGTAGACGCCTTTGTTGCTAATGGCAATCGTTACAATCTCCTAAATTCTGCAATTCTCGAACTTTTTGAGTATATTCGGAAGGAGAACCTGAAATTATTACTAAAATATATAGTTGATTCTTTCTGGGACCAGCTTGTGAAGTTTGAGTATTTGGTTTCCATTCACGCACTGAAAGTGAAATATGAGCAGTGTTTGGATAATTTTGGGACAGAAGGTACTGCTAATCTGTCTGACCTTCGAAGACGAATTGATGAACGTGCTCTGGAGAAAGAAGAAGAAGACTACTTTAATGAGGACAGTGATGAGGAGGATACAACCTCTGCATCTGTTTCACATGATAAAAAAGGGCAGCAAAAACAACTTACTTTAGTCAATGGAGTTGCTGCAAGTTACTCACAATTAAGTCCTAGGTCTGGTGGACTTGTTGACTATGATGATGATGAGGATGATGAAGACTACAGGCCACCTCCAAAGAAGCATCCAGAAACTTCTGAAGATGATGAAGGGACAATGGAGTCTCTCAGGCTGAAAAGGAAATTGCCTCCAAAGGACAAGGATCCAGAGCTTGTGAAGAAACAGAAGTTGTCTAAAAATTCAAAACCAAAAGATAACGTTTTTGCTGCGTTGTGCTCAACATTGAGTCAGGTCGTGATACCTGGGAAGAAGACTGCAATCAACATTCATACAGGTCCTTGGAAAATTGATGGGAGGATGAGCCCATGTAAGGACAATCAAGAAAAGGAGCCGGATGTTTTGAGAAGCGGCTCTGAGAATAGCGACACAGCAGCTGAAGAAAACCATGTAGAGAAAGAGACTGCTGCCTCTAGGTACTATTCTGATAGTCCGCAAGCAACTTCAGATAATGGACAGTTGAATGGCGAGGAAAATCCACTGGTTTCACCAAATTCCTCACCGGAGATGACTGTAAATGGATCATAA 5484 0.4092 MEEAKSRWLRPNEIHAILCNNKYFTIRVKPVHLPKSGTVVLFDRKVLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGTEERIHVYYAHGQDNPSFVRRCYWLLDKSLEHVVLVHYRETQEVVLQGSPVTPVYSYSSSSSDPTAPLILPEGLDSGTNIAYTDGLNDNLTVKSHEIRLHELNTLEWDDLVASNDNTSTKPAEGNVPCLHQQNQSLLNGSFGHSPCHQVASNPSAEVPSFDNSTQPISGSNCVSHSFLEIGNVQKDCPISLVSVDSLDTLVNGGLQSQDSFGKWINGIILDSPCSADESALKSSISSSVHKPNSSYVVDNQNSSLPEQVFNITEVSPAWASSTEKTKVLITGLFHNDYQSLAKSNLLCVCGDVSVPVEVVQVGVYRCWVSPHSPGFVSLYMSLDGHKPISQVVNFEYRTPVLHDPAAYMEGKHNREEFRLQMRLAHLLFTTQRSLDIFSSKVSPDALEYARKFVSKTSFMANSWQYLMKSTDDNTIPFSQAKNDLFEISLRNRLKEWLLERIVLDCNTTEYDAQGQGVIHLCAILGYTWAVSLFSWSGLTLDFRDKYGWTALHWAAYYGREKMVATLLSSGAKPNMVTDPTPQNPGGCTAADLAYVKGYDGLAAYLSEKSLVEQFNDMSLAGNISGSLETSTTDPVKSENLTEDQLYMKETLAAYRITAEAAARIQAAFREHSLKLRSQAIEFLSPEDEARHIVAAMKIQHAFRNFESRKMMAAAARIQHKFRAWKLRREYLHMRRQAIIIQAAFRGFQVRRQYRKIIWSVGVLEKVILRWRLKRKGFRGLQVNPVEEIKDDKQESDIEEDFFRIGRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLAHSQAKRVKVYRLNDDGKWDDQGTGHVTVDYLEGQCIPLLLKHSVNLRAGDERSEELGLFVYDEEDNETILLHRITSDDIYRKQEDTIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMQFNNLNSEAFHSVNSELRDLPAVELSTLPLILKPTITFLVEDMEVLVSVYLPYFFAINPLSILEALASHCHITVVESGIADQLRLTELVLNDTSEFLVLSEYIIKFVYGLEIENIGQLSQDFFRKLVEVFRVCEDLENMDGLHMIFKIVKGIILLNSTQIFERLFSDEFIMDIIGSLEYDPEVPHFKHHRKFLKEHVIFKEAIPIKNNLVLSKIHQTYRVGFLKDVVLARVLDEATVACFNSIIHANNATVVSLLKDDNTFIQELFARLKTPTTSLESKKNMVYFLHEFCNLSKNLPMVQQLQFFRDLTNEGIFDIITDVLQSQDKKLVLTGTDVLMLFLNQDPNLLRSYVVRKEGVTLLGLLVRGMITDFGDDMHCQFLEILRSLLDSCALAGAGAQRDTIIDIFYEKHLGQLIEVITSSCPSENVACESNKPIGPGLGVQYQSETKAEILSNICELLSFCVLHHPYRIKCNFLLNNVIDKILLLTRRREQYLRVGAVRFVRTILSRNDEHLINHFVRNNLLKPIVDAFVANGNRYNLLNSAILELFEYIRKENLKLLLKYIVDSFWDQLVKFEYLVSIHALKVKYEQCLDNFGTEGTANLSDLRRRIDERALEKEEEDYFNEDSDEEDTTSASVSHDKKGQQKQLTLVNGVAASYSQLSPRSGGLVDYDDDEDDEDYRPPPKKHPETSEDDEGTMESLRLKRKLPPKDKDPELVKKQKLSKNSKPKDNVFAALCSTLSQVVIPGKKTAINIHTGPWKIDGRMSPCKDNQEKEPDVLRSGSENSDTAAEENHVEKETAASRYYSDSPQATSDNGQLNGEENPLVSPNSSPEMTVNGS 1827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1673 1827 MobiDBLite consensus disorder prediction 1667 1714 - -
Lal5g1673 1827 ProSiteProfiles IQ motif profile. 841 869 IPR000048 GO:0005515
Lal5g1673 1827 MobiDBLite consensus disorder prediction 1605 1634 - -
Lal5g1673 1827 MobiDBLite consensus disorder prediction 1649 1719 - -
Lal5g1673 1827 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 876 - -
Lal5g1673 1827 Pfam IQ calmodulin-binding motif 762 781 IPR000048 GO:0005515
Lal5g1673 1827 ProSiteProfiles IQ motif profile. 760 784 IPR000048 GO:0005515
Lal5g1673 1827 Gene3D - 734 784 - -
Lal5g1673 1827 MobiDBLite consensus disorder prediction 1754 1789 - -
Lal5g1673 1827 SUPERFAMILY PH domain-like 871 986 - -
Lal5g1673 1827 SMART ANK_2a 612 643 IPR002110 GO:0005515
Lal5g1673 1827 SMART ANK_2a 573 602 IPR002110 GO:0005515
Lal5g1673 1827 SUPERFAMILY ARM repeat 1240 1565 IPR016024 -
Lal5g1673 1827 Pfam Ankyrin repeats (3 copies) 530 602 IPR002110 GO:0005515
Lal5g1673 1827 SMART CG_1_2 1 118 IPR005559 GO:0003677
Lal5g1673 1827 Gene3D - 505 642 IPR036770 -
Lal5g1673 1827 Gene3D - 867 1005 IPR011993 -
Lal5g1673 1827 ProSiteProfiles CG-1 DNA-binding domain profile. 1 123 IPR005559 GO:0003677
Lal5g1673 1827 SMART iq_5 736 758 IPR000048 GO:0005515
Lal5g1673 1827 SMART iq_5 759 781 IPR000048 GO:0005515
Lal5g1673 1827 SMART iq_5 839 861 IPR000048 GO:0005515
Lal5g1673 1827 MobiDBLite consensus disorder prediction 1791 1827 - -
Lal5g1673 1827 SUPERFAMILY Ankyrin repeat 523 635 IPR036770 -
Lal5g1673 1827 MobiDBLite consensus disorder prediction 1745 1827 - -
Lal5g1673 1827 ProSiteProfiles Ankyrin repeat region circular profile. 573 601 - -
Lal5g1673 1827 Gene3D Immunoglobulins 332 427 IPR013783 -
Lal5g1673 1827 Pfam Phosphatase 4 regulatory subunit 3 1109 1297 IPR006887 -
Lal5g1673 1827 SUPERFAMILY E set domains 337 424 IPR014756 -
Lal5g1673 1827 Gene3D - 1217 1557 IPR011989 -
Lal5g1673 1827 ProSiteProfiles Ankyrin repeat profile. 573 605 IPR002110 GO:0005515
Lal5g1673 1827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 670 787 IPR027417 -
Lal5g1673 1827 Pfam CG-1 domain 3 116 IPR005559 GO:0003677
Lal5g1673 1827 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 876 - -
Lal5g1673 1827 ProSiteProfiles IQ motif profile. 737 763 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1673 Lal-Chr5 18958418 18984606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1673 1 871 CAMTA Transcription Factor Family AT3G16940 55.074 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lal5g1673 SMK-1 1.1e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1673 K17491 K21596 gmx:100819198 1318.14