Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1665 ATGGACTCACAACAGGAGCTGATAGTAGCAAAGGTATGTGAAACTTATGATAAGATCTCAAAGTTAGAAAACCTTAATCCCTCCAATGATATAGCACATGTGACAAGTGAAGTTAAGGAGTATGAGGTGGTGTTCTTGGCAGCACTAGTAGGCATGAACAAAAGGGAGAAAGAAAAAGTCATCAACCACTTAGCAAAACACATGGCTGATGGAGCTATTTTGGTGCTAAGGAGTGCACCAAGTGCTACTAAAATAACCAATATTGTCTGCCAAATGTTTTGA 282 0.3936 MDSQQELIVAKVCETYDKISKLENLNPSNDIAHVTSEVKEYEVVFLAALVGMNKREKEKVINHLAKHMADGAILVLRSAPSATKITNIVCQMF 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1665 93 PANTHER NICOTIANAMINE SYNTHASE 30 84 - -
Lal5g1665 93 PANTHER NICOTIANAMINE SYNTHASE 1 32 - -
Lal5g1665 93 Pfam Nicotianamine synthase protein 30 82 IPR004298 GO:0030410|GO:0030418
Lal5g1665 93 Gene3D Vaccinia Virus protein VP39 6 90 IPR029063 -
Lal5g1665 93 PANTHER NICOTIANAMINE SYNTHASE 3 1 32 IPR004298 GO:0030410|GO:0030418
Lal5g1665 93 PANTHER NICOTIANAMINE SYNTHASE 3 30 84 IPR004298 GO:0030410|GO:0030418
Lal5g1665 93 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 93 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1665 Lal-Chr5 18899236 18899860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1665 30 79 Nicotianamine Synthase Gene Family AT1G09240 70.000 5.94e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1665 K05953 - qsu:112028738 75.8701