Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1660 ATGGAGGGCAGATTAGAGAGCAGGGTTCTAATAAGAGAATTTGATGAAGATAAAGATTATAAGATAGTGGAGAAGCTTGAGAGGAACTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGGTAGGAGACCCTTTATCTAGGATTAGGTTCTACCCCCTTCATGTTACATTGGTAGCTGAGCTTCTTGAAACCAAGGAGCTTGTAGGAGTGGTTAGAGGATGCATTAAGAGTATGGGAACTCCTTCTGAATCACTTTTCAAGATGGGTTGCATACTAGGCCTTAGAGTCTCTCCTTCTCACAGGAGAAAAGGGGTTGCACTAAAACTTGTGACCTCAGTTGAAGAATGGATGGTGAGAAATGGAGCTGAGTACGCATCCCTAGCCACTGAAAAGAATAATGATGCCTCCATAAACCTATTTACCATCAAATGCAACTATGTGAATCTTAGTTCACTTTTCATATTTGTCCATTCAATTTCAACTAGCCCCCCTACAGAGCATATATCTAGGGATATCAAAATAGAGAAAGTGAATATAGATCAAGCAATTTCCTTATACAGAAGAACCTTGAGGTCCAAAGAGTTATATCTATTAGATATGGATGTTATTCTGAAGGAGAAGCTAAGTCTAGGCACATGGGTAAGTTATTTCAAAGATGAGGGCAAACTTAACTTGATGAAAATGGTAGATAATGAGAATAATATTATTACCAATGAAACTTCAAGCTCATCATGGGTCATGTTTAGCATATGGAATACTTGTGAAGCTTATAAGCTTCAACTTAAAAAGTCACAACCATTGAGATTTCTTCATACCACTCTAAATCATGCAAGAGAGAAAATTTTCCCTTGTTTGAGAATGTCCCTAAGTGAGTCATTGTGTAAGCCTTTTGGGTTTCTCTTCCTTTATGGACTCCATGGAGAAGGAGAGAACCTTGGGGAGCTCATGGAATCAATATGGAGGTTCACATCAAGATTAGGAGAGAGCATGAAGGATTGCAGAGTGGTTATAACTGAGTTAGGGTTTGGTGATCCACTTACAAAATATGTCCCTCAAACAGATTCTATGTCATGTATGGATGATCTTTGGTACACTAAAAGACTTTCAAGCCAAATAGGAGAAAAATATGAATTTCTAGTGAAGGGACAAGTAGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1197 0.3851 MEGRLESRVLIREFDEDKDYKIVEKLERNCEIGTKKGVSIFTNMVGDPLSRIRFYPLHVTLVAELLETKELVGVVRGCIKSMGTPSESLFKMGCILGLRVSPSHRRKGVALKLVTSVEEWMVRNGAEYASLATEKNNDASINLFTIKCNYVNLSSLFIFVHSISTSPPTEHISRDIKIEKVNIDQAISLYRRTLRSKELYLLDMDVILKEKLSLGTWVSYFKDEGKLNLMKMVDNENNIITNETSSSSWVMFSIWNTCEAYKLQLKKSQPLRFLHTTLNHAREKIFPCLRMSLSESLCKPFGFLFLYGLHGEGENLGELMESIWRFTSRLGESMKDCRVVITELGFGDPLTKYVPQTDSMSCMDDLWYTKRLSSQIGEKYEFLVKGQVGNVFVDPRDF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1660 398 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 144 IPR016181 -
Lal5g1660 398 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 213 IPR000182 GO:0016407
Lal5g1660 398 CDD NAT_SF 61 131 - -
Lal5g1660 398 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 1 398 - -
Lal5g1660 398 Pfam Acetyltransferase (GNAT) family 60 149 IPR000182 GO:0016407
Lal5g1660 398 Gene3D - 13 163 - -
Lal5g1660 398 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1660 Lal-Chr5 18868376 18871104 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal5g1660 Acetyltransf_1 2.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1660 - - gmx:100814448 614.379