Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1655 ATGGCTTCTTTGTCATCTTTGCATGCTTCAATATTCATATTTGCAATGATTCTCATTTTCATGATCTTGTGTTGCATGCCATATAGTGCTCTTGGAACTGATGCTCAAACTGTTATAGACTCTCCTTTGCTAACACAAAGGTTAGGAATTAATCGCACTATCAAAGTCGATATCAATGGAAAAGGGGACTTCAAATCTGTCCAAGCTGCTATAGATTCCATTCCTGAAGGAAATTCTAATTGGGTGATTGTACATGTTAGAAAAGGAGTATACAGAGAAAAGGTACATATACCAAAGACTAAGCCTTATATATTCATGAGAGGGAATGGAAAAGGAAAAACTGCCATTGTTTGGTCGCAGAGCTCTGAGGATAATGTGGCTTCTGCTACCTTCAAAGCCGAAGCCAAAGACTGCATTGTCTTTGGAATTAGCTTCAAGAATGAGGCACCTACAGGGGTTGCATATACCTCACAGAATCAATCAGTGGCAGCATTTGTAGCAGAAGACAAAATAGCATTCTACCATTGTGCATTTTATAGTACTCATAACACTCTCTTTGATTACAAAGGCAGACATTACTATGAGTCCTGTTACATTCAAGGCTCAATTGATTTCATATTTGGCCGTGGAAGATCAATATTTTATGGTTGTGAGATGTTTGTGATTGCTGATGAAAGGATAAAGATTCTTGGGTCAGTCACAGCACAAAACAGGGAAGCAGAGATTGAGATGAGTGGGTTCATATTTATCAAAGGCAAGGTCTATGGCATTGGTGGGGTGTACTTAGGAAGGGCTAAAGGTCCTTTTTCTAGGGTCATTTTTGCTAAGACATACCTCTCTAAGACCATTGTGAGAGAAGGGTGGACCAACTGGAGCTATGATGGCAGCACACAAAATCTATTGATGGGGGAATACAAGACTCGTGGACCTGGAGGCAGTATAGAAGGACGTGTTCCATGGTCAAGACAACTTACTGAACAAGAAGTTGCACCCTATTTGTCTATTGATTACATTGACGGCAAGAATTGGTTACCAGCATATTCACAATAG 1050 0.4 MASLSSLHASIFIFAMILIFMILCCMPYSALGTDAQTVIDSPLLTQRLGINRTIKVDINGKGDFKSVQAAIDSIPEGNSNWVIVHVRKGVYREKVHIPKTKPYIFMRGNGKGKTAIVWSQSSEDNVASATFKAEAKDCIVFGISFKNEAPTGVAYTSQNQSVAAFVAEDKIAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRGRSIFYGCEMFVIADERIKILGSVTAQNREAEIEMSGFIFIKGKVYGIGGVYLGRAKGPFSRVIFAKTYLSKTIVREGWTNWSYDGSTQNLLMGEYKTRGPGGSIEGRVPWSRQLTEQEVAPYLSIDYIDGKNWLPAYSQ 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1655 349 SUPERFAMILY Pectin lyase-like 50 346 IPR011050 -
Lal5g1655 349 PANTHER PECTINESTERASE 67-RELATED 12 347 - -
Lal5g1655 349 ProSitePatterns Pectinesterase signature 2. 199 208 IPR033131 -
Lal5g1655 349 Gene3D - 48 349 IPR012334 -
Lal5g1655 349 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 12 347 - -
Lal5g1655 349 Pfam Pectinesterase 55 340 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1655 Lal-Chr5 18836854 18838911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1655 1 344 Carbohydrate Esterase AT5G47500 33.241 3.89e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1655 - - mtr:MTR_2g033970 558.14