Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1634 ATGGAAGAGACATTTGTTCCATTTCGCGGAATAAAAAATGATGTTCAGCAAAGATTGATGTATTACAAGCAAGATTGGATTGGTGGCCTCACAGCAGGTTTCAGGATATTAGCCCCTACCACATATATATTTTTTGCATCAGCAATTCCAGTTATTTCATTTGGGGAACAATTGGAGAGAGACACAGATGGAGTACTCACTGCAGTACAAACATTAGCATCTACTGCATTGTGTGGAATTATACACTCTATTATAGGAGGCCAGCCTTTGTTGATTCTCGGAGTAGCAGAACCAACTGTAATAATGTATACATTCATGTTCAACTTTGCTAAAAGTAGACCAGAGTTGGGTTCAAAGCTCTTTCTAGCATGGTCTGGATGGGTATGCATGTGGACAGCTATATTGTTGTTCCTTCTGGCTATCTTAGGAGCTTGCTCGATCATCAACAGGTTCACTCGCCTAGTAGGGGAACTATTCGGCCTTCTTATTGCAATGCTCTTCATGCAAGAGGCTATTAAAGGACTGGTTCATGAGTTTCATATACCCGAGAGAGCAGACCCAACATCAACTGAGTTTCAATCTTCATGGAGATTCGGAAATGGCATGTTTGCTTTGATTTTATCCTTTGGCCTTCTACTTACAGCATTGAAAAGCCGAAAAGCAAGGTCTTGGCGATATGGTTCAGGATGGTTACGAGGCTTCATTGCAGATTATGGTGTCCCATTGATGATTATATTATGGACTTCTTTTTCTTATATACCAGCTGGTAGTATTCCAAAAGGAATCCCTAGGCGCCTCTTCAGTCCAAATCCATGGTCTCCTGGTGCATATGAAAGCTGGACTGTCATAAAGGACATGCTGAATGTGCCAATCCACTACATTTTTGGTGCATTTATTCCGGCGACAATGATTGCTGTGCTATATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAGTTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATTTACTTCTTTTGGGATTCATGGTTATATTATGTGGTCTAATCGGAGTTCCTCCGTCAAACGGTGTCATACCACAGTCTCCAATGCACACCAAAAGTTTAGCTACATTAAAGCACCTGTTACTTAGAAACCGGCTTGTTGCAACAGCTCGACGTTGTATGAAAAACCATGCAAACTTGGGACAAGTATATGGAAGCATGAAAGAAGCTTACTGGCAAATGCAAAGCCCTTTAGTTCACCAAGAACCTTCCTCTCAGGGACTAAATGAGTTGAAAGAGTCAACTATTCAATTGGCATCAAGCATGGGGACTATAAATGATCCAGTTGACGAGTCAATATTTGATGTTGAGAAGGAAATTGATGACCTATTGCCTGTTGAGGTTAAAGAACAAAGAGTGAGCAACTTGCTCCAATCTTTGATGGTAGGAGGATGTGTAGCAGCAATGCCTTTCCTGAAAATGATTCCTACTTCTGTACTCTGGGGCTATTTCGCTTTCATGGCCATCGAAAACTTACCTGGCAACCAGTTCTGGGAACGGATTTTATTAATGTTTACAGCTCCAAGCAGAAGATACAAAGTTCTGGAGGAGTGCCATGCAACTTATGTGGAATCTGTACCTTTCAAGACAATTGCAGTATTTACACTGTTTCAGACTGCTTACTTGCTTGTTTGTTTTGGTATCACTTGGGTTCCAATTGCTGGGGTTCTATTCCCACTGATGATCATGCTTCTGGTTCCCATAAGACAATATATTCTGCCCAAGTTTTTCAAAGGGGTACACCTTCAGGATTTAGATTCTGCAGAATATGAAGTACTTGCTTTACCATTCGATCTAGCTACGGAGAGGAACTTGGGTAAGACAGCATCCTTTACAGATGGAGAGATTCTAGATGGAATGATTACAAGAAGTCGGGGCGAGGTTAGACATGTTTGCAGTCCAAAGGTGGTGAACTCCACTGAAACACCATCCACTGAGCTCACTATTCTTCAAAGTCCAAGGCTCCCGGATAAATTACACAGCCCCCGGCTAAGGCCAACTCAGAAGAAGTCACAGCCCTCAAGCTGA 2070 0.4188 MEETFVPFRGIKNDVQQRLMYYKQDWIGGLTAGFRILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKSRPELGSKLFLAWSGWVCMWTAILLFLLAILGACSIINRFTRLVGELFGLLIAMLFMQEAIKGLVHEFHIPERADPTSTEFQSSWRFGNGMFALILSFGLLLTALKSRKARSWRYGSGWLRGFIADYGVPLMIILWTSFSYIPAGSIPKGIPRRLFSPNPWSPGAYESWTVIKDMLNVPIHYIFGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGVPPSNGVIPQSPMHTKSLATLKHLLLRNRLVATARRCMKNHANLGQVYGSMKEAYWQMQSPLVHQEPSSQGLNELKESTIQLASSMGTINDPVDESIFDVEKEIDDLLPVEVKEQRVSNLLQSLMVGGCVAAMPFLKMIPTSVLWGYFAFMAIENLPGNQFWERILLMFTAPSRRYKVLEECHATYVESVPFKTIAVFTLFQTAYLLVCFGITWVPIAGVLFPLMIMLLVPIRQYILPKFFKGVHLQDLDSAEYEVLALPFDLATERNLGKTASFTDGEILDGMITRSRGEVRHVCSPKVVNSTETPSTELTILQSPRLPDKLHSPRLRPTQKKSQPSS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1634 689 PANTHER BORON TRANSPORTER 3-RELATED 1 685 - -
Lal5g1634 689 Gene3D Helical hairpin bin 18 60 - -
Lal5g1634 689 MobiDBLite consensus disorder prediction 666 689 - -
Lal5g1634 689 Pfam HCO3- transporter family 201 372 IPR011531 GO:0006820|GO:0016021
Lal5g1634 689 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Lal5g1634 689 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Lal5g1634 689 PANTHER ANION EXCHANGE PROTEIN 1 685 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1634 Lal-Chr5 18706765 18715660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1634 1 678 Antiporters AT3G62270 76.642 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1634 K24194 - gmx:100795777 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1634 5 18706765 18715660 Lal11g0293 11 2079881 2086308 LSH