Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1622 ATGGAAATATTTTTGGAGGATAAAATAAGAAATTGTTTGGGAAACATGAAATACACTTATAAGAATAAACTATACAGATATGGAAGTAGTGGAATGTATAAGGCATTAATGTTTGGAAACCCAAGTGTAATAGTGACAACACCAGAAGCATGCAAGAAAATATTGACAGATGATGATAACTTCAAACCAGGTTGGCCTCTCTCTACAATACAACTCATTGGAAAGAAATCATTCATTGCAATGTCTTATCAAGAACATAAGCGCCTTAGGCGTTTAACTTCAGCTTCAATCAATGGCATGGAAGCATTGTCTTTGTACTTGACATATATTGAAGATAATGTGAAAAGTTCATTAGACCAATGGTCCAACATGGGACAAATTGAGTTCTTAACTCAGATAAGGAAGCTTACTTTCAAAATCATTATGTATATTTTCCTTAGCTCGGAAAGTGATTCTGTTATGGAGGCTTTGGAAAGAGAGTACACAACACTTAATTATGGAGTTAGAGCAATGAGAATTAATATTCCTGGTTTTGCTTATCATAAAGCATTCAAGGCTAGGAAAAATCTAGTGACTATGTTTCAATCTATTGTGGATGAGAGAAGAAAGCTAAGGAATGAGTATATACCCATCAAAGCTAAAGATATGATGGATGCACTGATAGATGTTAAAGATGAAAATGGTAGAAAATTGGAAGATGAGGAGATCATAGATATCATGTTGATGTACTTGAATGCCGGTCATGAATCTTCAGGGCATATTACCATGTGGGCAACCTATTTCCTACAAAAGCATCCAAAATATCTTCATAAAGCTAAGGAGGAACAAGAAGAAATAATAAGGAAAAGGCCTTCAACACAAAAAGGGTTGACACTTAAGGAAATTCGGCAAATGGATTTTCTTTATAAGGTGATTGATGAAACAATGCGTGTGATTACATTCTCATTGATGGTTTTTCGGGAGGCAAAATCTGATGTTAGCATCAATGGTTACACCATTCCAAAAGGATGGAAAACTCTTGTCTGGTTCAGATCAGTTCACCTTAATCCCGAAATATATCCTAATCCGAAGGAATTCAACCCTCATAGATGGGATGATCACAAGGCAGGAGAATTCATTCCCTTTGGAGCAGGAACTAGATTATGTCCAGGGAATGAACTAGCCAAGATGGAGATAGCAGTTTTTCTTCATCATTTCATTCTAAATTACCAGCTTGAACAAATTAATCCTAAATGCCCTGTAAGATACTTACCACATACAAGGCCCATGGATAATTGCTTGGGAAGGATCAAGAAATGTTCAACTAAATCAATCTAA 1317 0.3561 MEIFLEDKIRNCLGNMKYTYKNKLYRYGSSGMYKALMFGNPSVIVTTPEACKKILTDDDNFKPGWPLSTIQLIGKKSFIAMSYQEHKRLRRLTSASINGMEALSLYLTYIEDNVKSSLDQWSNMGQIEFLTQIRKLTFKIIMYIFLSSESDSVMEALEREYTTLNYGVRAMRINIPGFAYHKAFKARKNLVTMFQSIVDERRKLRNEYIPIKAKDMMDALIDVKDENGRKLEDEEIIDIMLMYLNAGHESSGHITMWATYFLQKHPKYLHKAKEEQEEIIRKRPSTQKGLTLKEIRQMDFLYKVIDETMRVITFSLMVFREAKSDVSINGYTIPKGWKTLVWFRSVHLNPEIYPNPKEFNPHRWDDHKAGEFIPFGAGTRLCPGNELAKMEIAVFLHHFILNYQLEQINPKCPVRYLPHTRPMDNCLGRIKKCSTKSI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1622 438 Pfam Cytochrome P450 32 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS E-class P450 group I signature 255 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS E-class P450 group I signature 342 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PANTHER CYTOCHROME P450 26 23 434 - -
Lal5g1622 438 PANTHER ENT-KAURENOIC ACID OXIDASE 2 23 434 - -
Lal5g1622 438 SUPERFAMILY Cytochrome P450 15 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 Gene3D Cytochrome P450 7 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS P450 superfamily signature 246 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal5g1622 438 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1622 Lal-Chr5 18631224 18635025 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1622 26 430 Cytochrome P450 AT1G05160 66.912 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1622 K04123 - gmx:100781238 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1622 5 18631224 18635025 Lal3g0159 3 1057803 1061051 LSH
Lal5g1622 5 18631224 18635025 Lal11g0301 11 2150026 2155984 LSH