Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1604 ATGATTGAGAAGGCTCGTAAACTTGTTGAAAGCTACATGGAGAAACCACAGTCACAACCTGAGTTGCAGCTAGACCTTACTCTAGGAATTGGATGTTCATATGCTCCCTCACAAGCAAATTGTATAAACATATCAGCAGTACAAGGTGTTCCTCAGAATCTAGGTCTATCTTCAGATGAAAATATAATGCCCAAAGCACAAATGATAGGGGCTGCAATTGCTGCCAAGGATGAATTACTTCAGCTTTTGACCATCAATGAACCCTTATGGGTCAAGTCTCCAATCGGCAATGAAACACTAATTCTTCGTCGTGTTAGCTACGAAATGTTCTTTCCTAGGGTTCCATTGATCAAAAGTTCCAAAACAAGAGAAGAATCATCAAAGGGTTCAAGAATTGTGAGCATTAATCCAAAGAAATTAGTTGACATGTTTATGGACCCGGACATATGGCGCCATCTTTTCTCAACAATTATTTCAAATGCTCACACAATCCAAGTAGTTGAGATGGGATCGTTAGAAAAACGAAGTGGAGCTATATCATTGATGTATGCAGATATGCATGTTCTTTCACCTTTGGTACCATCTAGGGAATTCAACTTCCTTCGCTATTGTGCACAAATTTCAGATAGTGTTTGGGTTATCACAGATGTGTCTTTTGATTACTTAAAAGAGAAAACCATTCCTTCAAATTCTTGGAGGCTTCCCTCAGGATGTCTAATCAAGGCATTGCTTAATGGGTTTACAGAGGTTACTTGGGTGGAACACGTGGAAGTGGATGACAACATCCAAACACATTCTCTCTACAAAGATGTTGTTAGCACTGGTATTGCTTATGGTGCACAAAGATGGCTTTCAGAACTTTCAAGAATGTCTGAGCGTCTTTCCAGCTTTGTGCCTAACTACATACCTTGTCATGACACTGGTTCAGTAATTGGTGTAGCTGAAGGGAGGAAGGGTATAATTAAGCTGTGTCACAGAATGTTGAAAAGCTTCTGTGAAATGCTTAACATGTCAAAGAGAGGTTTGGAACAATTTATAAGTAGGAAGAGCAATGAAGGGGTTTGGATTTGTGTGAACCAGATGAACATAGAACCTGGCCAGAGAAATGGGAGAAGTTTGGTTGCTGCAGCCTCCTTTTGGCTCCCAAACCCTTTCAATGATGTTTTTCACTTTTTCATTGATGCAAATAAACGTCCTCAGTGGGATTTTTATTGGCGAGAAGATAATCCACCCATAGAGATTTCAAGAATCAGTAACAGACAAAACTCTGCAAACTTTATATCTATCTTTCAGGAAAAAACTCCAGCAACCAACCCTAGCGAACGTGTGATGATAATTCAAGAAAATTTTGTGAACCATTTGGGATCATATATTGTATATGCTCCAATTAAAGTGGGTGACTTAGCTGTGACTTTAAGGGGACATGATTTATCAATGGTATCTCTTCTGCCATCAGGCATCACTATATCTGAAGCTGTATCTACTGCAAATGTTGTTGCTGCTGGAGAAGCATCTAGTAGTAGAAATCATGGTAGAACAAGAGGTTCATTAGTCACTATTGCTTTGCAAATTCATATGTCAGATAATGTTAACTCAGATTTCATGGATGCTGCAAACTGTCTAGTGAACTCAACTGTGCAGAGGATAAAGGAGGGTTTGAATTTTCATTACTTGGAGTGA 1680 0.3923 MIEKARKLVESYMEKPQSQPELQLDLTLGIGCSYAPSQANCINISAVQGVPQNLGLSSDENIMPKAQMIGAAIAAKDELLQLLTINEPLWVKSPIGNETLILRRVSYEMFFPRVPLIKSSKTREESSKGSRIVSINPKKLVDMFMDPDIWRHLFSTIISNAHTIQVVEMGSLEKRSGAISLMYADMHVLSPLVPSREFNFLRYCAQISDSVWVITDVSFDYLKEKTIPSNSWRLPSGCLIKALLNGFTEVTWVEHVEVDDNIQTHSLYKDVVSTGIAYGAQRWLSELSRMSERLSSFVPNYIPCHDTGSVIGVAEGRKGIIKLCHRMLKSFCEMLNMSKRGLEQFISRKSNEGVWICVNQMNIEPGQRNGRSLVAAASFWLPNPFNDVFHFFIDANKRPQWDFYWREDNPPIEISRISNRQNSANFISIFQEKTPATNPSERVMIIQENFVNHLGSYIVYAPIKVGDLAVTLRGHDLSMVSLLPSGITISEAVSTANVVAAGEASSSRNHGRTRGSLVTIALQIHMSDNVNSDFMDAANCLVNSTVQRIKEGLNFHYLE 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1604 559 CDD START_ArGLABRA2_like 65 292 - -
Lal5g1604 559 Gene3D - 78 291 IPR023393 -
Lal5g1604 559 Pfam START domain 73 292 IPR002913 GO:0008289
Lal5g1604 559 SMART START_1 70 293 IPR002913 GO:0008289
Lal5g1604 559 SUPERFAMILY Bet v1-like 325 529 - -
Lal5g1604 559 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 59 555 - -
Lal5g1604 559 ProSiteProfiles START domain profile. 61 296 IPR002913 GO:0008289
Lal5g1604 559 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 59 555 IPR042160 -
Lal5g1604 559 SUPERFAMILY Bet v1-like 65 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1604 Lal-Chr5 18516040 18519270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1604 2 554 Homeobox Transcription Factor Family AT1G73360 35.889 4.28e-102 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1604 K09338 - gmx:100795075 416.772