Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1597 ATGAAGTTCTTTTGCCTTTTAGTGTTATCCTTATCTTTCTTCTCAGTTATGGGGCAGCTACCTTCCCAGGACATATTAGCATTGCTAGAATTTAAGAAAGGCATAAGGAATGACCCTACTGGTTATGTCCTCAGTTCCTGGAATGAGGAATCCATCGACTTTGATGGATGCCCGTCTTCATGGAATGGAGTTCTGTGTAATGGTGGTAATGTTGCTGGTGTCGTCCTTGATAACCTAGGTCTCTCTGCTGATGCCGATTTGAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAACTCTCCATGTCCAACAATTCCATATCAGGAAAACTACCTGACAACATTGGTGATTTCAAAAGCCTTCAATTCCTGGATATCTCCAATAACCTCTTTTCTTCATCATTACCGTCGGGAATCGGTAACTTAGGTAGCTTGCAGAATCTGTCACTGGCTGGAAATAATTTCTCTGGCCTAATTCCAGACACTATTTCAAAACTTGCTTCTATCCAGTCTTTAGACTTGAGCCGAAATTCCTTTTCTGGAGCACTGCAAGCATCATTGACTAAACTGAAAAGTTTGGTATCTCTTAACTTGTGTAATAATTGTTTCACTGGAAAAATTCCCAAAGGTTTTCAGCTGATGCCTTCTCTTGAAAAACTTGACTTGCATGGGAATATGCTCGATGGTCATTTAGATGCCGAATTTCTTCTTTTAGCAAGTGTGAGCTATGTAGATTTCAGTGATAATAGGCTAGTAAGTTCTGATTCTCAGAGGCAGAAGTTTCTACCGCGAATATCTGAAAGTATTAAGCATCTAAACCTAAGCCATAACCTGCTTACTGGGACATTGGTTAGTGGAGCTGAGCAACCAATTTTTGAGAACTTGAAAGTGTTGGACCTCAGCTACAATAATTTGGATGGAGAATTGCCTGGATTTGATTTTGTTTATGATCTCCAGGTCCTTAAGCTTAGCAACAACAGGTTTTCAGGATTTATTCCTGACGGCTTACTAAAAGGAGACTCTTTGGTTTTAACTGAACTGGATTTTAGTGCCAACAACCTTTCAGGGCCACTAAGTATAATTACTTCAACAACGCTGCATTTTCTTAATCTCTCGTTAAATGGATTCACGGGTGAGCTGCCACTACTGACTGGAAGCTGTACCGTACTTGATCTGTCAAACAACAACTTTGAAGGAAATTTAACCAGAATGGTGAAATGGGGGAACATAGAATATCTTGATCTCAGTGTGAATCATTTGACAGGGAGCATCCCTGAGGCAACTCCTCAATTTTTGAGATTGAATTATTTGAATCTATCCCATAACTCTCTTAGCAACTTCCTACCAAGAGCCTTAACACAGTATCCAAAGCTTAGAGTGCTTGACATTAGTTCCAACCAGTTAGATGGACTACTTCTACCTGATCTGTTCGCAATGCCGACTTTGCAAGAGCTCCATCTTGAAAATAATATGATCTCTGGCAGCGTTAATTTATCATCTTCTACTGGTCATTCTGATCTTCGGATTCTTGATCTTTCTTACAACCAGTTTGCTGGCTATTTTCCTGATAAGTTTGGGTCATTACATGGCATGAAAATTCTCAATATTGCTGGTAATAATTTTTCTGGTTCTCTTCCAACTGCCATTTCTGACATGATTTCTCTAGAATCCTTGGATATATCAGAGAATCTCTTCACTGGCCCTCTACCAAATAACATGCCGGAGGGGCTCAATAACTTTAATGCTTCTCAAAATGATCTGTCCGGAGTTGTTCCAGAAGATCTTAGAAAGTTCCCTACTACTTCTTTCTTTCCCGGGAATGCTAAGCTGCATTTTCCAAATGTTCCTCCTGGAAAAACTGATTCACCACCTGAAAGTTCCAAGAAGAAGCATATGAACACTATGGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTTATATTAACTTTGCTTGCTATATTTATACACTACATACGTATATCAAGATCTTCACCAGAATATGATACACATAAGGATATCCACGTACGTGCTCAACCAATCATCTCTGGCCCTGTCCCCGTTCGTACATCAGAAAGGGGTGGTGCTTTGGTTGTATCAGCTGAGGAGCTTATGACCTCACGTAAAGGATCACCGGTTGAGGCCATCAGCCCTGATGAAAAAATGGTAGCTGTAACTGGTTTCTCCCCATCTAAAGCCAGCCACTTTTCATGGTCACCAGAATCTGGTGATTCATTTACTGCTGAAAATCTTGCAAGGCTAGACACAAGATCCCCGGATAGGTTGATTGGAGAGCTGCATTTTCTTGATGATATAATAGCATTGACACCTGAGGAACTGTCAAGGGCTCCAGCCGAAGTTTTGGGCAGAAGCAGTCATGGTACTTCTTACAAAGCAACTCTGGACAATGGTTTATTATTGAGAGTGAAGTGGTTGAGAGAAGGAGTAGCGAAACAGAGAAAAGAATTTGTTAAAGAGATCAAAAAGTTTGCAAACATCAGGCATCCTAATGTTGTGGGACTGAGAGGATATTATTGGGGCCCTACACAGCACGAGAAGCTTATTCTTTCAGATTACATCTCACTGGGAAGTCTTGCAAGTTTTCTATATGATCGACCAGGAAGAAACGGTCCACCGTTAACATGGGCACAGAGGCTAAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGTGCTGTTCCTCACGGGAACCTCAAAGCTACAAATGTGTTGCTTGATACCGCTGACATGAATGCACGTGTAGCTGATTACTGCCTTCACCGACTTATGACTCAAGCTGGTACTACCGAACAGATTCTTGATGCAGGGGTGTTAGGTTATCGTTCACCAGAGTTAGCTGCGTCGAAGAAGCCAATGCCCTCCTTCAAATCAGATGTTTATGCTTTTGGAGTGATAGTTTTGGAACTTTTAACCGGAAGGTGTGCTGGTGATGTGATATTTGGTGATGAGGGAGGCGTTGATCTGACCGACTGGATAAGGTTGCGGGTAGCAGAAGGTCGATGCTCGGAATGTTTTGATGCTACATTGATGCCGGAAGTTAGTAATAATGTTATAGAAAAGGGAATGAAGGAAGTTCTAGGAATAGCCATTAGATGCATTAGGTCTGTTTCTGAAAGGCCAGGAATAAAGACTATATATGAAGATCTTTCTTCTATATAG 3198 0.4106 MKFFCLLVLSLSFFSVMGQLPSQDILALLEFKKGIRNDPTGYVLSSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADADLSVFSNLTKLVKLSMSNNSISGKLPDNIGDFKSLQFLDISNNLFSSSLPSGIGNLGSLQNLSLAGNNFSGLIPDTISKLASIQSLDLSRNSFSGALQASLTKLKSLVSLNLCNNCFTGKIPKGFQLMPSLEKLDLHGNMLDGHLDAEFLLLASVSYVDFSDNRLVSSDSQRQKFLPRISESIKHLNLSHNLLTGTLVSGAEQPIFENLKVLDLSYNNLDGELPGFDFVYDLQVLKLSNNRFSGFIPDGLLKGDSLVLTELDFSANNLSGPLSIITSTTLHFLNLSLNGFTGELPLLTGSCTVLDLSNNNFEGNLTRMVKWGNIEYLDLSVNHLTGSIPEATPQFLRLNYLNLSHNSLSNFLPRALTQYPKLRVLDISSNQLDGLLLPDLFAMPTLQELHLENNMISGSVNLSSSTGHSDLRILDLSYNQFAGYFPDKFGSLHGMKILNIAGNNFSGSLPTAISDMISLESLDISENLFTGPLPNNMPEGLNNFNASQNDLSGVVPEDLRKFPTTSFFPGNAKLHFPNVPPGKTDSPPESSKKKHMNTMVKVIIIVSCVVALFILTLLAIFIHYIRISRSSPEYDTHKDIHVRAQPIISGPVPVRTSERGGALVVSAEELMTSRKGSPVEAISPDEKMVAVTGFSPSKASHFSWSPESGDSFTAENLARLDTRSPDRLIGELHFLDDIIALTPEELSRAPAEVLGRSSHGTSYKATLDNGLLLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISLGSLASFLYDRPGRNGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTADMNARVADYCLHRLMTQAGTTEQILDAGVLGYRSPELAASKKPMPSFKSDVYAFGVIVLELLTGRCAGDVIFGDEGGVDLTDWIRLRVAEGRCSECFDATLMPEVSNNVIEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1597 1065 ProSiteProfiles Protein kinase domain profile. 783 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1597 1065 ProSiteProfiles Leucine-rich repeat profile. 293 315 IPR001611 GO:0005515
Lal5g1597 1065 Gene3D Ribonuclease Inhibitor 190 256 IPR032675 -
Lal5g1597 1065 MobiDBLite consensus disorder prediction 609 628 - -
Lal5g1597 1065 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Lal5g1597 1065 Pfam Leucine Rich repeat 293 307 IPR001611 GO:0005515
Lal5g1597 1065 SUPERFAMILY RNI-like 266 586 - -
Lal5g1597 1065 Pfam Protein tyrosine and serine/threonine kinase 787 984 IPR001245 GO:0004672|GO:0006468
Lal5g1597 1065 Gene3D Phosphorylase Kinase; domain 1 770 860 - -
Lal5g1597 1065 Gene3D Ribonuclease Inhibitor 257 620 IPR032675 -
Lal5g1597 1065 SUPERFAMILY Protein kinase-like (PK-like) 786 1062 IPR011009 -
Lal5g1597 1065 SUPERFAMILY L domain-like 45 380 - -
Lal5g1597 1065 PANTHER OS07G0626500 PROTEIN 5 1065 - -
Lal5g1597 1065 Pfam Leucine rich repeat 184 226 IPR001611 GO:0005515
Lal5g1597 1065 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Lal5g1597 1065 Pfam Leucine rich repeat 506 563 IPR001611 GO:0005515
Lal5g1597 1065 Gene3D Ribonuclease Inhibitor 22 185 IPR032675 -
Lal5g1597 1065 SMART LRR_typ_2 430 453 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 551 575 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 291 313 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 165 188 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 117 140 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 454 478 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 314 338 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 141 164 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 213 237 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 189 212 IPR003591 -
Lal5g1597 1065 SMART LRR_typ_2 93 116 IPR003591 -
Lal5g1597 1065 PANTHER - 5 1065 - -
Lal5g1597 1065 Gene3D Transferase(Phosphotransferase) domain 1 862 1065 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1597 Lal-Chr5 18444811 18450147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1597 3 1015 Receptor kinase-like Gene Family AT4G36180 28.183 7.87e-85 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal5g1597 PK_Tyr_Ser-Thr 3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1597 - - gmx:100793639 1748.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g1597 5 18444811 18450147 Lal5g1597 5 18444811 18450147 ECH
Lal5g1597 5 18444811 18450147 Lal3g0174 3 1160836 1166028 LSH
Lal5g1597 5 18444811 18450147 Lal11g0316 11 2280034 2285402 LSH