Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1579 ACTTGTAAGGAACATATAGTCATGGACAAAACTTACTTCCTTTTCACTTTACTATTCTCATTTCACTATTTCATTGCAATGGCTTCCTTAGATATAGACCAATCTGCACTACTAGCCTTTAAATCTTATATAACTTTGGACCCTCAAAACATATTGGCCAATAATTGGTCTACTTCATCCTCAGTGTGCAACTGGGTTGGGGTCACTTGTGATACCAACTTCAGTAGAGTCATAACCTTAACCCTAGCAAACATGGGTTTAAATGGTACCATTCCTCCTAACTTGGGAAATTTATCTTCTCTTGTTGAACTTGACCTTCACAACAATAGCCTTCATGGGATAGTTCCTAATGAGTTGGCCTTGTTATCTAGGTTGGAGAATTTCAACTTGTGCAGCAACAACTTTGGTGGAGAATTTCCAACATGGGTGGGGGAGTTATCTAAACTAGAGTTCTTGAGTCTATGCAATAACAGTTTTTCAGGTTCAATTCCTGCATCTTTGTCCAACTTGGAAAGGCTAGAGAGTTTGGATTTGAGCTTTAATTCCATTGAGGGTAGCATTCCACCCGAGCTTGGAAGGCTTCCAAACTTGACTGTTTTGGATTTGGCACACAATAGGCTATCTAGCAATATTCCTTCTTCAATCTTCAATATTTCCACACTACAAGTGGTTGATTTGTCCAATAATTCCTTATCAGGAAACATCCCTCAAAAACTTGGAGATTTGTCACAGCTTAGAAGTATAAATTTGAGCATAAATAAACTCTTAGGCTCTATACCATTATCCTTGTTCAACATGTCAACTCTTCAAGAGATTCAATTCACTTACAATAATTTATCTGGTTCTCTTCCAATGGACTTGTGTAATGGGGTTCCAATGCTTGAAATGCTTGACCTATCTGGAAATGCATTTTCTGGTCTATTTCCATCAAATTTACTTCAATGTAAACAACTCAAATATTTGAAGATTATTGGTAATAGATTAAATGGTAACCTATCTAATGAGATTGGGATATTACCTATGCTTGAGGTGTTGGATCTTAGTAACAACAATCTAACAGGTGAAGTTCCAGAATCTCTTTTCAACATCTCCACTTTGAGAGTAATTAATCTTAGGGACAATTTCTTTGTTGGTCAACTTCCAGAAAAAATGTGCCAGAATACTCCCTTTCTTCAACAATTTAATTTAACAAATAATAAAGTTGGAGGAATCATTCCAAGGTCTATTAGCAATTGCACCTCATTGAAAAGTTTATTAATGGGATTCAACTCTTTCACAGGTACCATACCTTATGAGATTGGTGAGTACTTGAAAAACCTTGTGATATTGCATTTGCAAAATAACAACTTGAGAGGATCTATTCCATCAAGTATCTTTAACATCTCAGGGTTACAAAGTCTGTCATTATCATATAACCAACTCTCAGGAAACCTTCCAATTTATCCATATCATACCCTTTCCAATCTCCATTTCCTATACCTTACAAACAATTCTCTAAGTGGAGAAATTCCTACTAGTCTTTTCAATGCTACAATGCTTTCTAGCTTAGTACTTATCAACAATTCATTTACAGGAGTTATACCTGATTCTATTGGAAATTTAGTAAACCTTCAACTACTTGGACTATTAGGAAACAACTTAACTAGTGATCCAGCTTCTCCTGAAATGAGTTTCCTCACTTCATTGACAAAGTGTAGGAAGCTAAAAAGTCTTGTATTATCATACAATCCTCTAAATGGAGCACTTCCAAGTTCTATAGGAAACCTCTCAAACACTCTACAATCTTTTGTAGCATGGAACTGTAATCTCAAGGGTCAAATTCCTTCACAGATTGGCAATTTAAAGAACTTGTTTGATATTGATTTTAGCAACAACCAACTCATAGGACAAATTCCTAGTACACTTGGCTCTTTGTTGTTTCTCCAACGTTTGGATCTTTCAGGCAACAAACTTAATGGCTCTATCCCAGGTCAGATTTGTGAGCTAACAAATTTGAATGAGATGTCTCTTCAACATAATAATATTTTTGGGCTAGTGCCAGAATGCTTAGGGGGTCTTACTAAACTAAGAAAACTTTATTTGGATAACAATAACCTAAACTCTATAATACCTTCTTCCCTTTGGAGCCTCAGTGATATATTGGAAGTGAGCTTAGCCTTTAATGGTTTTACTGGATCTTTGCCAGCTGAGATAAGTGGAATGAATAGTGTGATAAAATTGGATATATCAAATAATAAGCTTCATGGGAATATTCCTACTGATATTGGTGACTTGGAGAAATTATTAAACCTCTCATTAGCAAATAATATGTTACAAGGGTCTATTCCTGATTCAGTTGGCAGCATGGTAAGTTTGGAATATTTGGACCTTTCCCATAATATTTTATCAGGCATTATCCCTAAGTCAATGCAGAAACTTGTTTATATCCGATTTATGAACTTGTCTTACAACAGACTAGAAGGAGAAATTCCTTCTGGTGGTGAATTTGCAAATTTCACAGCTAAATCATTCATGATGAATAGTGCACTCTGTGGGAGACCTGAGCTACAAGTCCCACCATGTCCTAGAGGAGGAGAACATGGCAAGAAAACCAAAAAGCTTGTGTTGGAGTTGGTTTTACCTTTAACTCTTGTTGGTGCACTTATTGTTTTTGCAACTCTCATCATACACAGGAGAAGTTATAGTAAAGGATCAAGTATTGTTGTCTTACCATCATTCCAATTTGCAAGTAGAATTTCCTACTATGAACTTTTGGATGCAACAAATAGTTTTCATGACAGCAATCTTATTGGTAAAGGGGGTATTGGTTCTGTATTCAAAGGTGTGCTTTCAAATGGAATGGTGGTTGCAGTTAAAGTATTCAATTTGGATGTACAAGGGGCATCAAGGAGTTTTGACATAGAATGTGAAGCAATGCGCAATCTTCGTCATCGAAATCTAGTAAAAGTCATTACTAGCTGTTCAAATGAATTTGATTTCAAAGCTCTAGTAATTGAATTTGTGCCAAATGGTAGCTTGGAGAAGTGGTTGTATTCTTATAACTATTTCATTCCTTTCTTACAAAGGTTGAACATAATGATAGATGTTGCATTTGCCTTGGATTATCTCCATCATGGTAATTCAAAACCAGTGGTGCACTGTGACTTAAAGCCAAGTAATGTTTTGTTGGATGAAGATATGGTTGCTCATGTTTGTGACTTTGGCATTGCTAAACTCTTAGAAGAAGGACAATCTCAAGCACTTACCAACACCTTAGCAACTATTGGTTATATTGCTCCAGAATATGGATTAGAAGGTATTGTGTCTGTTAAAGGGGATGTGTATAGCTATGGTGTTATGCTGATGGAAGTATTTACAAGAAAGAGGCCAACTGATGAAATGTTTATAGATGGACTAAGCTTAAGGTCATGGATTAAAGAGTCATTATTACCAAATGAGATCATTCATATTGTTGACCCTAACTTGATGGAGGAAGAGGAATTATTTATTCCTCCTAAGAAAGTAGCTTTCTTAAGTATCATGGAATTGGCTTTGAATTGTTCTTCAGATTCACCTGCTGAGAGAATGACCATGAAGGAAGTCTTAGACAGCTTGAACAAAATAAGAACCATATTTTTACATATGGTATAA 3630 0.3581 TCKEHIVMDKTYFLFTLLFSFHYFIAMASLDIDQSALLAFKSYITLDPQNILANNWSTSSSVCNWVGVTCDTNFSRVITLTLANMGLNGTIPPNLGNLSSLVELDLHNNSLHGIVPNELALLSRLENFNLCSNNFGGEFPTWVGELSKLEFLSLCNNSFSGSIPASLSNLERLESLDLSFNSIEGSIPPELGRLPNLTVLDLAHNRLSSNIPSSIFNISTLQVVDLSNNSLSGNIPQKLGDLSQLRSINLSINKLLGSIPLSLFNMSTLQEIQFTYNNLSGSLPMDLCNGVPMLEMLDLSGNAFSGLFPSNLLQCKQLKYLKIIGNRLNGNLSNEIGILPMLEVLDLSNNNLTGEVPESLFNISTLRVINLRDNFFVGQLPEKMCQNTPFLQQFNLTNNKVGGIIPRSISNCTSLKSLLMGFNSFTGTIPYEIGEYLKNLVILHLQNNNLRGSIPSSIFNISGLQSLSLSYNQLSGNLPIYPYHTLSNLHFLYLTNNSLSGEIPTSLFNATMLSSLVLINNSFTGVIPDSIGNLVNLQLLGLLGNNLTSDPASPEMSFLTSLTKCRKLKSLVLSYNPLNGALPSSIGNLSNTLQSFVAWNCNLKGQIPSQIGNLKNLFDIDFSNNQLIGQIPSTLGSLLFLQRLDLSGNKLNGSIPGQICELTNLNEMSLQHNNIFGLVPECLGGLTKLRKLYLDNNNLNSIIPSSLWSLSDILEVSLAFNGFTGSLPAEISGMNSVIKLDISNNKLHGNIPTDIGDLEKLLNLSLANNMLQGSIPDSVGSMVSLEYLDLSHNILSGIIPKSMQKLVYIRFMNLSYNRLEGEIPSGGEFANFTAKSFMMNSALCGRPELQVPPCPRGGEHGKKTKKLVLELVLPLTLVGALIVFATLIIHRRSYSKGSSIVVLPSFQFASRISYYELLDATNSFHDSNLIGKGGIGSVFKGVLSNGMVVAVKVFNLDVQGASRSFDIECEAMRNLRHRNLVKVITSCSNEFDFKALVIEFVPNGSLEKWLYSYNYFIPFLQRLNIMIDVAFALDYLHHGNSKPVVHCDLKPSNVLLDEDMVAHVCDFGIAKLLEEGQSQALTNTLATIGYIAPEYGLEGIVSVKGDVYSYGVMLMEVFTRKRPTDEMFIDGLSLRSWIKESLLPNEIIHIVDPNLMEEEELFIPPKKVAFLSIMELALNCSSDSPAERMTMKEVLDSLNKIRTIFLHMV 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1579 1209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 23 147 - -
Lal5g1579 1209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 292 432 - -
Lal5g1579 1209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 415 1206 - -
Lal5g1579 1209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 146 286 - -
Lal5g1579 1209 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 200 332 - -
Lal5g1579 1209 SUPERFAMILY L domain-like 263 551 - -
Lal5g1579 1209 SUPERFAMILY RNI-like 486 825 - -
Lal5g1579 1209 PRINTS Leucine-rich repeat signature 221 234 - -
Lal5g1579 1209 PRINTS Leucine-rich repeat signature 339 352 - -
Lal5g1579 1209 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 146 286 - -
Lal5g1579 1209 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 415 1206 - -
Lal5g1579 1209 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 23 147 - -
Lal5g1579 1209 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 292 432 - -
Lal5g1579 1209 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 200 332 - -
Lal5g1579 1209 Gene3D Ribonuclease Inhibitor 186 290 IPR032675 -
Lal5g1579 1209 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Lal5g1579 1209 SMART LRR_sd22_2 782 803 - -
Lal5g1579 1209 SMART LRR_sd22_2 437 463 - -
Lal5g1579 1209 SMART LRR_sd22_2 170 185 - -
Lal5g1579 1209 SMART LRR_sd22_2 98 130 - -
Lal5g1579 1209 SMART LRR_sd22_2 686 707 - -
Lal5g1579 1209 SMART LRR_sd22_2 194 220 - -
Lal5g1579 1209 SMART LRR_sd22_2 638 664 - -
Lal5g1579 1209 SMART LRR_sd22_2 565 591 - -
Lal5g1579 1209 SMART LRR_sd22_2 339 365 - -
Lal5g1579 1209 SMART LRR_typ_2 686 710 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 98 121 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 614 638 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 291 315 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 339 363 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 242 266 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 782 805 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 662 685 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 437 461 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 170 193 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 194 218 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 146 169 IPR003591 -
Lal5g1579 1209 SMART LRR_typ_2 486 510 IPR003591 -
Lal5g1579 1209 Pfam Protein kinase domain 924 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1579 1209 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Lal5g1579 1209 Pfam Leucine rich repeat 761 819 IPR001611 GO:0005515
Lal5g1579 1209 Pfam Leucine rich repeat 195 255 IPR001611 GO:0005515
Lal5g1579 1209 Pfam Leucine rich repeat 664 721 IPR001611 GO:0005515
Lal5g1579 1209 SUPERFAMILY L domain-like 33 289 - -
Lal5g1579 1209 ProSiteProfiles Leucine-rich repeat profile. 784 805 IPR001611 GO:0005515
Lal5g1579 1209 Gene3D Transferase(Phosphotransferase) domain 1 1001 1205 - -
Lal5g1579 1209 Gene3D Phosphorylase Kinase; domain 1 907 1000 - -
Lal5g1579 1209 ProSiteProfiles Leucine-rich repeat profile. 688 709 IPR001611 GO:0005515
Lal5g1579 1209 Pfam Leucine Rich Repeat 342 360 IPR001611 GO:0005515
Lal5g1579 1209 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Lal5g1579 1209 Gene3D Ribonuclease Inhibitor 558 855 IPR032675 -
Lal5g1579 1209 SUPERFAMILY Protein kinase-like (PK-like) 900 1198 IPR011009 -
Lal5g1579 1209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1044 1056 IPR008271 GO:0004672|GO:0006468
Lal5g1579 1209 ProSiteProfiles Leucine-rich repeat profile. 196 218 IPR001611 GO:0005515
Lal5g1579 1209 ProSiteProfiles Protein kinase domain profile. 924 1206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1579 1209 SMART serkin_6 924 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g1579 1209 Gene3D Ribonuclease Inhibitor 291 557 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1579 Lal-Chr5 18296490 18301993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1579 7 1202 Receptor kinase-like Gene Family AT5G46330 34.095 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lal5g1579 Pkinase 9.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1579 - K13420 gmx:100784397 1113.98