Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1578 ATGTTATCATTGAATGTTGTTCCATCATCATTATCCTCTGTCACTTTCATCAAACCCAATAATCAATGTCTCATAAATGCATCTACAAACCTCAAATCAAATATTCTCAGCAGAATTCAGAGTCACAGAACCACTTCTCAGCTTCATGAATCAGGTCTCAAAAGTTCTAAACTTTCTTTCATGCCCACATCTCAGATCCAAGATTCAATCACAAAGTTAAGTTCTTTTAGAAGATTCCTCGCATACCCATTTGAGGTTTCACCAAAACCCAATCACCAAATTGTGAAAGCAGCATCTGGTGATGCAAATCCTGAGGGAGAAAAAGAAATTGTAGCTAATACCAATGACCCCAAATCTAAGAAACTCAAACTTGCTCTAGTTTTTGGGCTATGGTACTTCCAAAACATTGTCTTCAACATTTACAACAAGAAAACCTTAAACATATTCCCATTCCCATGGCTCCTTGCATCTTTTCAGCTTTTTGTGGGGTCCATTTGGATGCTTGTGCTTTGGTCCTTAAAGCTCCAACCTTGTCCAAAAATCTCAAAACCTTTCATCATTGCTCTCCTTGGACCTGCTTTGTTCCACACAGTAGGCCACATCTCAGCATGTGTTTCATTCTCTAAGGTTGCTGTTTCATTCACTCATGTCATCAAATCTGCTGAGCCAGTTTTCTCTGTCATATTCTCTTCTGTCCTTGGTGATAGATACCCCATTCAGGTTTGGCTCTCAATTCTGCCCATTGTCCTAGGTTGTTCTCTAGCTGCTGTTACTGAAGTTTCTTTCAATGTGCAAGGATTATGGGGTGCCCTTATTAGCAATGTTGGCTTTGTGTTGAGGAATATATATTCTAAGAGAAGTTTACAGAATTTCAAGGAAGTTGATGGATTGAACATGTATGGGTGGATTACTATTATTTCATTGTTCTATCTTTTTCCAGTGGCTATTTTTGTTGAAGGGTCTCAGTGGATTCCAGGGTATTATAAGGCAATTGAAGCTATAGGGAAACCAACCACATTTTATATATGGGTGATGCTGTCTGGGGTGTTCTACCATCTTTATAACCAATCATCTTACCAAGCCTTGGATGAAATTAGCCCTCTAACTTTCTCAGTGGGAAACACAATGAAGAGAGTGGTGGTGATTGTGTCGTCAGTTATAGTGTTCAGAAATCCGGTTAGGCTTCTCAATGGTGTTGGTTCCGCTATCGCAATTCTTGGGACTTTCCTGTATTCACAGGCAACAGCTAAAAAGAAAGTGAAGAAAATTGAAGAAACAGAGAGAGAAGATAAACAACGGAATCCAAATTTGAAAAATGATGAGTTACAAACAGTGATTGAGCAGCAACAAGTTGGGTTTAAAGATGGAAGCTTTGGCAGCAAAACTTCCAAGAGTAAACTTACAATCAATTCTATGGAATTTATGGTTTGA 1431 0.3871 MLSLNVVPSSLSSVTFIKPNNQCLINASTNLKSNILSRIQSHRTTSQLHESGLKSSKLSFMPTSQIQDSITKLSSFRRFLAYPFEVSPKPNHQIVKAASGDANPEGEKEIVANTNDPKSKKLKLALVFGLWYFQNIVFNIYNKKTLNIFPFPWLLASFQLFVGSIWMLVLWSLKLQPCPKISKPFIIALLGPALFHTVGHISACVSFSKVAVSFTHVIKSAEPVFSVIFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWGALISNVGFVLRNIYSKRSLQNFKEVDGLNMYGWITIISLFYLFPVAIFVEGSQWIPGYYKAIEAIGKPTTFYIWVMLSGVFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVSSVIVFRNPVRLLNGVGSAIAILGTFLYSQATAKKKVKKIEETEREDKQRNPNLKNDELQTVIEQQQVGFKDGSFGSKTSKSKLTINSMEFMV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1578 476 Pfam Triose-phosphate Transporter family 122 412 IPR004853 -
Lal5g1578 476 PANTHER SOLUTE CARRIER FAMILY 35 34 425 - -
Lal5g1578 476 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 413 - -
Lal5g1578 476 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 34 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1578 Lal-Chr5 18290668 18294255 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1578 25 424 Antiporters AT5G17630 68.106 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g1578 K15283 - gmx:100779531 679.478