Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g1575 ATGAAGGAAGGGGGTGGAAGGAAGAATGGTGCAGCCACACCTTGTGCTGCATGCAAGCTTCTGAGGAGAAAGTGTGCCCAGGATTGTGTTTTTGCGCCATATTTCCCACCCAATGAGGCCCACAAGTTTTCCAATGTACACAAAGTCTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACCTACCAATGCATCAAAGAGGGGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCCAGAGTCAGAGACCCTGTCTATGGCTGTGTAGGAACCATTTCTTCTCTTCAACAGCACATTGACCTGCTTCAGACCCAACTGGCCTTGGCCCAAGCTGAGGTGGTTCATCTAAGGGTGTCTCAAACTAAACACATTTCAAATCATGTGCTTAGCCCAACTAATAGTGGCTCACCATCATCCAAGATCATGGCCTCTCATTCCAACCCTATTTTTGATATGGACATGGTAGTGGACCAGGCTAGCTATCATGATTCATTGTGGCCATGA 507 0.4753 MKEGGGRKNGAATPCAACKLLRRKCAQDCVFAPYFPPNEAHKFSNVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGTISSLQQHIDLLQTQLALAQAEVVHLRVSQTKHISNHVLSPTNSGSPSSKIMASHSNPIFDMDMVVDQASYHDSLWP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g1575 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 152 - -
Lal5g1575 168 Coils Coil 93 113 - -
Lal5g1575 168 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Lal5g1575 168 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Lal5g1575 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g1575 Lal-Chr5 18272695 18274098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g1575 1 167 AS2 family AT1G31320 64.912 5.13e-68 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal5g1575 LOB 9e-43 No_clan